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Name : LIV_2641 (LIV_2641) Accession : YP_004856353.1 Strain : Listeria ivanovii PAM 55 Genome accession: NC_016011 Putative virulence/resistance : Virulence Product : putative capsular polysaccharide biosynthesis protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG3944 EC number : - Position : 2778201 - 2778914 bp Length : 714 bp Strand : - Note : similar to capsular polysaccharide biosynthesis protein DNA sequence : ATGGAAAAAACTCTCGATATTAAATATATCGGTCAATTTTTCAAAAAATATTGGTATATCATTGTCGCTGCATGTGTCGT AGGGATGATAGCAATCGCTTTTTATACCTCTTACTTTGTTACACCGATTTATCAAGTGTCTACAGATGTGCTCGTTAATC AGAAAAAAAATGAGCAAGTAACTGTCTCAGATGTGCAATCAAATCAGCAGTTTGTCAATACCTATTCAGTTATTTTGACA AGTAGTCGGATTCTAGATCAGGTCAAAGACAACTTAAACTTACCACAGTCTGTCAAACAATTGAAACAACAAATAACGAT TGAAAATGTAGCGAACTCACAAGTAATTACGATTAAAGTAACGGATAGTTCCGCAGAAAAAGCCACTCTTATTGCCAATA AAGTAACGACTGTATTCAAAGATAACATCAAGAATATCATGGACCAACAAAATGTCAGCATCTTGTCAGAAGCAAAGGCT GATGATAATAATATCCCTATTAAGCCAAATAAAAAGTCCGCGCTTGTTATGGGCGCTTTTGGAGGACTAGTTATAGGAAT CTTATTCTCTTTCTCACTACAACTTCTTAACACAACAATTAAATCCGAAAAAGATATTGAAGCGCTGACAGATATTCCAA TCCTAGGTTCTATTCAAAAAGAACGGAAGAAGAGGAGGCGCCATGCCAAAAGAACGTTCAAAACTACTCATTAA Protein sequence : MEKTLDIKYIGQFFKKYWYIIVAACVVGMIAIAFYTSYFVTPIYQVSTDVLVNQKKNEQVTVSDVQSNQQFVNTYSVILT SSRILDQVKDNLNLPQSVKQLKQQITIENVANSQVITIKVTDSSAEKATLIANKVTTVFKDNIKNIMDQQNVSILSEAKA DDNNIPIKPNKKSALVMGAFGGLVIGILFSFSLQLLNTTIKSEKDIEALTDIPILGSIQKERKKRRRHAKRTFKTTH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1A | AAA64640.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 4e-25 | 43 |
| SSP0060 | YP_300150.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 6e-24 | 42 |
