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Name : kdpB (LIV_2601) Accession : YP_004856316.1 Strain : Listeria ivanovii PAM 55 Genome accession: NC_016011 Putative virulence/resistance : Unknown Product : putative potassium-transporting ATPase subunit b Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2216 EC number : - Position : 2737605 - 2739650 bp Length : 2046 bp Strand : - Note : - DNA sequence : ATGATGGAAAAAGGTATTTGGAAAGATGCGCTAATTCAGTCGATGAAAAAATTGTCTCCGAAGTTGCAAGTGAAGAACCC AGTAATGTTGCTCGTTTATATAGGAGCAATTTTGGCGACCGGGCTTTATTTTCTTGGGCTTTGGGGGATTTCGGATGAAA AGTCTGGTTACACACTCGCGATTGCACTTATTTTATGGTTTACGGTGTTATTTGCTAATTTTGCAGAGGCGATTGCAGAA GGACGTGGCCGTGCGCAGGCAGATAGTTTGAAGCTGGCACGAAAAGATGTGCTTGCTCGGAAGTTAAAAACCGTAAGTGA CAAGTCTGATATTATCGAAGTAGCTTCTAATGATTTAAAAAAAGGGGATATTGTATACGTACTAGCAAATGAACAGATAC CGATGGACGGCGAAGTTATTGAAGGGGCAGCATCGGTTGATGAAAGTGCGATAACTGGGGAATCGGCACCGGTAATACGT GAGTCAGGTGGGGATAGGAGTGCTGTGACTGGTGGAACAACACTTGTTTCAGATTGGCTTGTTATTCAAGTGACAGCAGT CTCAGGAGAAAGTTTCTTAGATAAAATGATTGCGATGGTGGAAGGCGCCTCTCGGAAAAAGACACCAAATGAAATTGCCT TACAGATTTTGCTTGTAACGCTTTCGATTATTTTTTTAGCTGTTTCAGCAACACTATTACCATTTACGGAATTTGCGAGT AAACAGGCAGGATCAGGATCGGCGATATCAATTACAAATGTGATTGCCTTGCTTGTTTGTTTGGCACCAACAACAATTGG AGCACTACTTTCTTCTATTGGAATTGCTGGAATGAGTCGTTTAAATCAAGCCAATGTTTTAGCGATGAGTGGCCGGGCAA TTGAGGCTGCTGGAGATGTTGATGTACTTTTATTAGATAAAACAGGGACTATTACGCTTGGAAATCGCAAGGCTAGTGAG TTTTTGCCAGTGGAGGGTGTAAGTGAACAAGAACTAGCGGATGCAGCCCAACTATCCTCTATTGCTGATGAAACTGCAGA AGGGCGGAGTATTGTTGTGTTAGCAAAAGAACGGTTTGATATCCGTGGCCGGGATTTTGCTGAGATGCACGCAGAATTTA TTCTATTTACCGCCACCACGCGAATGAGCGGCATTGATTATCAAGGAAATACGATTCGAAAAGGTGCTGCTGATGCCGTG CGCACATATGTTACGACAAATGGAGGCAACTATCCACAAGAATGTGATGCAATTGTGAGCAAAGTCGCTGGTGCTGGTGG AACTCCGCTTGTTGTAGTTCGTAATAACAAAGTGCTAGGTGTTATATATTTAAAAGATATCGTGAAAAATGGTGTAAAAG AACGTTTTCTTGATTTGCGGAAAATGGGTATTAAAACAATAATGATTACTGGTGACAATCCGATGACTGCGGCCGCAATT GCAGCAGAAGCAGGTGTAGATGACTTTCTAGCAGAAGCCACTCCAGAAGCGAAATTAGAACTAATTCGTCAATATCAGCA CGAAGGTCATTTAGTTGCCATGACTGGTGATGGAACAAATGACGCACCCGCACTTGCTCAAGCGGATGTTGCAGTTGCAA TGAACACGGGAACACAAGCCGCTAAAGAAGCTGGTAATATGGTGGACCTTGACTCTAGCCCAACAAAATTAATCGATATC GTTCGAATTGGAAAACAGCTTTTAATGACTCGAGGGGCCCTAACGACATTTAGTGTGGCTAACGATTTAGCTAAGTATTT TGCGATTATTCCCGTTCTTTTTTACGGGATATTCCCAGAACTTGCTGCACTAAACTTAATGGGCTTAACTAGTCCAACAA GTGCAATCTTGTCCGCGATTATTTACAATGCAGTGATTATTATCGCCTTGATCCCGTTATCTTTAAAAGGCGTTAAATAC CGTGAAATGCCTGCTGGGAAACTGCTTAGCCGAAATATGTTGATATATGGACTTGGCGGTTTGATTGCACCATTTATTGC GATTAAATTAATTGATATGTTATTAACTATTTTAGGAATCGTCTAA Protein sequence : MMEKGIWKDALIQSMKKLSPKLQVKNPVMLLVYIGAILATGLYFLGLWGISDEKSGYTLAIALILWFTVLFANFAEAIAE GRGRAQADSLKLARKDVLARKLKTVSDKSDIIEVASNDLKKGDIVYVLANEQIPMDGEVIEGAASVDESAITGESAPVIR ESGGDRSAVTGGTTLVSDWLVIQVTAVSGESFLDKMIAMVEGASRKKTPNEIALQILLVTLSIIFLAVSATLLPFTEFAS KQAGSGSAISITNVIALLVCLAPTTIGALLSSIGIAGMSRLNQANVLAMSGRAIEAAGDVDVLLLDKTGTITLGNRKASE FLPVEGVSEQELADAAQLSSIADETAEGRSIVVLAKERFDIRGRDFAEMHAEFILFTATTRMSGIDYQGNTIRKGAADAV RTYVTTNGGNYPQECDAIVSKVAGAGGTPLVVVRNNKVLGVIYLKDIVKNGVKERFLDLRKMGIKTIMITGDNPMTAAAI AAEAGVDDFLAEATPEAKLELIRQYQHEGHLVAMTGDGTNDAPALAQADVAVAMNTGTQAAKEAGNMVDLDSSPTKLIDI VRIGKQLLMTRGALTTFSVANDLAKYFAIIPVLFYGIFPELAALNLMGLTSPTSAILSAIIYNAVIIIALIPLSLKGVKY REMPAGKLLSRNMLIYGLGGLIAPFIAIKLIDMLLTILGIV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kdpB | NP_814334.1 | potassium-transporting ATPase subunit B | Not tested | Not named | Protein | 0.0 | 73 |
| ef0088 | AAM75291.1 | EF0088 | Not tested | Not named | Protein | 0.0 | 73 |
| kdpB | NP_373310.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 6e-144 | 56 |
| kdpB | YP_190029.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 6e-144 | 56 |
| kdpB | YP_251949.1 | potassium-transporting ATPase subunit B | Not tested | SCCmec | Protein | 3e-144 | 56 |
| kdpB | BAA82181.1 | potassium-transporting ATPase(B chanin) | Not tested | Type-II SCCmec | Protein | 4e-144 | 56 |
| SAR0071 | YP_039539.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 6e-144 | 56 |
| kdpB(SCCmec) | NP_370597.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 6e-144 | 56 |
