Gene Information

Name : i-inlC (LIV_2501)
Accession : YP_004856221.1
Strain : Listeria ivanovii PAM 55
Genome accession: NC_016011
Putative virulence/resistance : Virulence
Product : putative soluble internalin
Function : -
COG functional category : S : Function unknown
COG ID : COG4886
EC number : -
Position : 2644390 - 2645280 bp
Length : 891 bp
Strand : -
Note : -

DNA sequence :
TTGAAAAAAAATAATTGGTTACAAAATGTAGTAGTAGCAATGCTAGTATTAATTGTAGGTTTGTGCATTAGTACAGGTTC
TGGAACAAAGGTACAGGCTGCGAGTATTCTACGACCAATGCCTATTAACCAAGTTTTTCCAGATCCTGGTCTAGCGAATG
CAGTGAAACAAAATTTAGGGAAGCAAAGTGTTACAGACCTTGTCTCTCAAAAGGAACTAGATGGAGTTCAAAATTTCAAT
GGAGATAATAGCAACATTCAATCCCTTGCAGGAATGCAATTTTTTACTAATTTAAAAGAACTGCATCTATCTCACAATCA
AATAAGTGATCTTAGTCCTTTAAAGGATTTAACTAAGTTAGAAGAGTTGTATGTGAATAGAAATAAACTGAAAAATTTAA
ACGGAATTCCAAGTGCTTGTTTAGCTCGCTTGTTTGTAGATAATAACGAACTCAGAGATACTGATTCGCTTATTCATTTG
AAAAATCTAGAAATCTTATCTATTCGTAATAATAAGCTAAGAAGTATTGTGGCGCTTGGCTTTTTATCTAAACTAGAGGT
ATTAGATTTGCATGGTAATGAAATAACAAATACAGGTGGACTAAATAGGTTGAAGAAAGTTAACTGGATAGATTTAACTG
GTCAGAAATGTGTGAATGAACCAGTAAGATATCAGCCGGAATTGTATATTACAAATACTGTCAAAGACCCAGATGGAAGA
TGGATTGCTCCATATTATATCAGTAATAATGGGAAATATGTAGATGGTTGTGTCATGTGGGAATTGCCAGTTTATACAGA
TGAAGTAAGCTATAAGTTTAGTGAGTATATAAGCGTTGGGGAAACTGAGGCTATATTTGATGGAACAGTGGTACAGCCTT
TGAGAAACTAG

Protein sequence :
MKKNNWLQNVVVAMLVLIVGLCISTGSGTKVQAASILRPMPINQVFPDPGLANAVKQNLGKQSVTDLVSQKELDGVQNFN
GDNSNIQSLAGMQFFTNLKELHLSHNQISDLSPLKDLTKLEELYVNRNKLKNLNGIPSACLARLFVDNNELRDTDSLIHL
KNLEILSIRNNKLRSIVALGFLSKLEVLDLHGNEITNTGGLNRLKKVNWIDLTGQKCVNEPVRYQPELYITNTVKDPDGR
WIAPYYISNNGKYVDGCVMWELPVYTDEVSYKFSEYISVGETEAIFDGTVVQPLRN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
i-inlC CAA68917.1 internalin C Virulence LIPI-2 Protein 4e-135 99
inlC CAA68919.1 internalin C Virulence Internalin Protein 2e-127 92
i-inlK CAC80807.1 internalin K Virulence LIPI-2 Protein 5e-73 56
i-inlD CAA68916.1 internalin D Virulence LIPI-2 Protein 1e-69 54
i-inlF CAI59953.1 i-InlF protein Virulence LIPI-2 Protein 4e-73 51
i-inlF CAA71105.1 i-InlF protein Virulence LIPI-2 Protein 4e-73 51
i-inlF CAA74581.1 i-InlF protein Virulence LIPI-2 Protein 8e-66 50
i-inlI CAC20608.1 internalin I Virulence LIPI-2 Protein 7e-36 42
i-inlE CAI59954.1 i-InlE protein Virulence LIPI-2 Protein 3e-37 41
i-inlE CAA71104.1 i-InlE protein Virulence LIPI-2 Protein 3e-37 41