|
Name : LIV_0241 (LIV_0241) Accession : YP_004854068.1 Strain : Listeria ivanovii PAM 55 Genome accession: NC_016011 Putative virulence/resistance : Unknown Product : putative succinyldiaminopimelate desuccinylase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0624 EC number : - Position : 279225 - 280367 bp Length : 1143 bp Strand : + Note : Similar to succinyldiaminopimelate desuccinylase DNA sequence : ATGGAGCAACAAAAAAAGTTACAAATTTTAAAAGACATTATCAACATTAACTCAACGAATGGACATGAAGAACAGGTCGC GAATTATTTGCAAAAATTGTTAGCGGAATACAGCATCCAAGCTGAAAAGGTGCACTATGACACAGATCGTGCGAGTCTTA TAAGCGAAATCGGCGCAGAGCAAGGACGAGTGTTAGCTTTTTCCGGTCATATGGATGTGGTGGATGCTGGAGATGTTTCT AAGTGGACCTTTCCGCCATTTGAAGCAACCGAATCGGATGGAAAAATTTATGGCCGTGGTTCTACCGATATGAAATCTGG TTTAGCTGCGATGGTCATTGCGATGATTGAGCTTCATGAAGAAAAAACTAAATTAAATGGGAAAATTAAATTATTGGCAA CAGTTGGAGAAGAAGTTGGAGAGCTCGGAGCGGAACAGCTCACTACGCAAGGTTACGCAGATGACATAGATGGTTTGATT ATCGGCGAACCAAGTGGACATCGGATTGTTTATGCGCATAAAGGTTCAATTAATTATACAGTCAAATCTACTGGTAAAAA TGCACATAGTTCAATGCCAGAATTCGGTGTTAATGCGATTGATAATTTGCTATTGTTTTATAATGAAGTAGAAAAGTTTG CGAAATCGGTCGACACTACAAACGAAATATTAGGTGATTTTATTCATAACGTCACCGTAATTAATGGTGGAAATCAAGTG AATAGCATCCCTGAAAAAGCAGAACTTCAAGGGAATATTCGCTCCATTCCAGAAATGAGTAATGAAACAGTGAAACAAGT GCTAGTGAAGATTATCAATGAGCTAAATAAACAGGAAAATGTGCAACTAGAGTTAATATTTAATTATGACAAACAACCAG TATTTAGCGATAAAAATTCAGAATTAGTGAAAATTGCTAAAAATGTGGCGAAAGACATTATTAAAGAAGAAATTCCATTA CTGGGGATTTCCGGAACAACGGATGCAGCTGAATTTACTAAAGCCAAAAAAGCCTTTCCAGTTATTATCTTCGGACCAGG AAACGAAACACCTCACCAAGTAAACGAAAATGTTTCGATAGATAATTATTTGGAAATGGTGGATGTATACAAGCGAATTG CTGTTGATTTCTTAAACCAATAA Protein sequence : MEQQKKLQILKDIININSTNGHEEQVANYLQKLLAEYSIQAEKVHYDTDRASLISEIGAEQGRVLAFSGHMDVVDAGDVS KWTFPPFEATESDGKIYGRGSTDMKSGLAAMVIAMIELHEEKTKLNGKIKLLATVGEEVGELGAEQLTTQGYADDIDGLI IGEPSGHRIVYAHKGSINYTVKSTGKNAHSSMPEFGVNAIDNLLLFYNEVEKFAKSVDTTNEILGDFIHNVTVINGGNQV NSIPEKAELQGNIRSIPEMSNETVKQVLVKIINELNKQENVQLELIFNYDKQPVFSDKNSELVKIAKNVAKDIIKEEIPL LGISGTTDAAEFTKAKKAFPVIIFGPGNETPHQVNENVSIDNYLEMVDVYKRIAVDFLNQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAC20637.1 | - | Not tested | Internalin | Protein | 6e-161 | 88 |
| dapE | CAA07459.1 | succinyl-diaminopimelate desuccinylase | Not tested | Internalin | Protein | 2e-162 | 88 |
