Gene Information

Name : LIV_2433 (LIV_2433)
Accession : YP_004856154.1
Strain : Listeria ivanovii PAM 55
Genome accession: NC_016011
Putative virulence/resistance : Unknown
Product : putative single-strand DNA-binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 2580215 - 2580598 bp
Length : 384 bp
Strand : -
Note : Similar to single-strand DNA-binding protein

DNA sequence :
ATGATTAATCAAGTAACTTTAGTAGGACGTTTGACAAAGGATCCAGAATTAAAATGGACCACGGAGGATAGAGCTGTTTT
GAATTTAACGCTTGCTTTGAATCGTTTTGGAAAAAATAAACGTGTAGATAATGATGCAGACTTTATTCAATGTGTCATTT
GGGGTAAAAGAGCCGAAGCGACAGCTGAATTCTGTAGCAAAGGACAATTAATAGGTGTGGCCGGTGAATTACAATCTAGA
AACTATTTAAATAAAGAAGAGCAAAAAATATATATTACTGAAGTGCTTGTTCATCAAATTAGGTATTTATCAAGTAGAAA
TAAGGAAGAGCAAGTTATTAATATTTCTCAAGAGGAGGAAGAATCGTGTAATACTTTGTTATAA

Protein sequence :
MINQVTLVGRLTKDPELKWTTEDRAVLNLTLALNRFGKNKRVDNDADFIQCVIWGKRAEATAEFCSKGQLIGVAGELQSR
NYLNKEEQKIYITEVLVHQIRYLSSRNKEEQVINISQEEEESCNTLL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ef0020 AAM75226.1 EF0020 Not tested Not named Protein 3e-23 53
ssb-2 NP_814280.1 single-strand binding protein Not tested Not named Protein 4e-23 53
SEQ_0802 YP_002746140.1 single-strand binding protein Not tested ¥ÕSeq2 Protein 1e-20 47
SAKOR_01963 YP_008492151.1 Single-strand DNA binding protein Not tested ¥ÕSa3 Protein 9e-21 47
SAOV_0290 YP_005735807.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa1 Protein 1e-19 46
SAV0864 NP_371388.1 ssDNA-binding protein Not tested ¥ÕSa1 Protein 6e-20 46
ssb-3 NP_814291.1 single-strand binding protein Not tested Not named Protein 2e-17 46
ef0030 AAM75236.1 EF0030 Not tested Not named Protein 1e-17 46
MW1921 NP_646738.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 2e-20 46
SAV1983 NP_372507.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 2e-20 46
SA1792 NP_375091.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 2e-20 46
SAUSA300_1958 YP_494609.1 single-strand binding protein Not tested ¥ÕSa3 Protein 1e-20 46
SAUSA300_1958 YP_494609.1 single-strand binding protein Not tested ¥ÕSa3 Protein 1e-20 46
SAOV_1956c YP_005737400.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa3 Protein 6e-19 45
SAOV_1081 YP_005736576.1 ssDNA-binding protein Not tested ¥ÕSa2 Protein 3e-19 44
SH1792 YP_253707.1 single strand DNA binding protein Not tested ¥ÕSh1 Protein 1e-18 44