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Name : LIV_2372 (LIV_2372) Accession : YP_004856098.1 Strain : Listeria ivanovii PAM 55 Genome accession: NC_016011 Putative virulence/resistance : Virulence Product : internalin peptidoglycan linked protein Function : - COG functional category : S : Function unknown COG ID : COG4886 EC number : - Position : 2516161 - 2517645 bp Length : 1485 bp Strand : - Note : similar to internalin, putative peptidoglycan linked protein (LPXTG motif) DNA sequence : ATGAGAAAGAGTACATGGTTAAAAAAGACATTCATACTGGCGCTAGTAATTATTGTTATTGGAGGAATTAAAACAAGTTA CGTTATGACAAGTAAAGCGGCGAGCCTAACAACTCCAACGCCTATTAATCAACTTTTTCCAGATCCTAATCTAGCTGAAG TAGTAAGGGAGGCTTTAGGGAGATGGAACGTTACAGATGCTGTATCACAAAGCGAATTAGATAGTATAGACACACTCCGC GCTAGCCATAAAAGTATCAAAAGGATTGATGGAATCCAATACTTAACCAATTTGAAGCTATTGTATTTTTTTGATAACCA GATAAGTGATATTAGTAAACTTGCTGAATTAACTGATTTAAGGTATCTATCTTTAAAAGACAATCAGGTGAAAGATGTAA GTGCTCTATCTAAACTAAACCGACTAAATGAATTAATTTTGGACAATAATCAGGTGATAGATATAAGTCCATTAGCAGGG TTGAAAAATCTTATAGTTTTAGACATACGTAACCAAACTTATACCAACCCGGCAATAAATTATCAAGAAAATATAGCGAT TCCGATTACCGTAAGAAATGAAACAAGTACGTTACTCCAATATTTAAAAGTGAGTAATAATGGTAAAGTAGCAAATCCGA ACCTTATGTGGAATTTATCCGCTTATGTGCCTGAAGTAAGTTATAGTTTTAGTGAATATCTAACGGTTGGAGGTGCAAGA ACTTTCTTCACGGGGAAAGTGGTGCAACCATTAAAACCAGTTTCTGCTAAAGCCTATTATGATATAGATGGTGTGGAAAC AGAAGAAAAAATGCAAGCAGGAATGTTATTAACCGAGCCGAAAACTCCAACCAAAGAAGGTTATACATTTAAAGGTTGGT ATAGCGCCGAGGCTTTTGGTAAGAAATGGAACTTTACAACCGATTATACACCAAGTTATGATTTTACCTTATATGCCCAA TTTAAAGTAAATAGCTATACAGCAACCTTAGAAGTTGGAGGGAAAACAACGACACAAAAAGTAGAATATCAAAAATATCT CCAAGAACCGGGAATGCCATCTAAAAAAGGTTATAGCTTTGAAGGTTGGTATGATGCAAAGAAAGGTGGCAAAAAATGGG ATTTTGTAATGAACAAAATGCCAGCAAAAGATATTACTTTATATGCTCAATTCAAAAAAAAAACTGAGTCAGAATCTAAC ATACAAGTAAATGGCGCAACTACACCATCATCAACAAATACAAATGGAAGCCATACAACTCCCCCTGCTAAAAGAGATGG TAATTCAAAAAGCACTATGAGTAAAATATCGAGAAATAACCGTTCTAATAAACAATTCCTGGACTTACAAGAAACTACAG ACAGTAATAAGGGGATTTATGATTCTCAAGGAACTACACTTCCAAAAAGCGGTGATAGTAAGAATGTGCCATTATTGGGA TTGCTTTTATTAGGTACTGCGTTTGTAATTAGTAAAAAGACATGA Protein sequence : MRKSTWLKKTFILALVIIVIGGIKTSYVMTSKAASLTTPTPINQLFPDPNLAEVVREALGRWNVTDAVSQSELDSIDTLR ASHKSIKRIDGIQYLTNLKLLYFFDNQISDISKLAELTDLRYLSLKDNQVKDVSALSKLNRLNELILDNNQVIDISPLAG LKNLIVLDIRNQTYTNPAINYQENIAIPITVRNETSTLLQYLKVSNNGKVANPNLMWNLSAYVPEVSYSFSEYLTVGGAR TFFTGKVVQPLKPVSAKAYYDIDGVETEEKMQAGMLLTEPKTPTKEGYTFKGWYSAEAFGKKWNFTTDYTPSYDFTLYAQ FKVNSYTATLEVGGKTTTQKVEYQKYLQEPGMPSKKGYSFEGWYDAKKGGKKWDFVMNKMPAKDITLYAQFKKKTESESN IQVNGATTPSSTNTNGSHTTPPAKRDGNSKSTMSKISRNNRSNKQFLDLQETTDSNKGIYDSQGTTLPKSGDSKNVPLLG LLLLGTAFVISKKT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| inlG | CAA07456.1 | internalin G | Virulence | Internalin | Protein | 3e-86 | 45 |
| inlF | CAC20634.1 | internalin F | Virulence | Internalin | Protein | 2e-86 | 45 |
| inlH | CAA07457.1 | internalin H | Virulence | Internalin | Protein | 2e-73 | 42 |
| inlD | CAC20635.1 | internalin D | Virulence | Internalin | Protein | 4e-72 | 41 |
| inlC2 | AAB67969.1 | internalin | Virulence | Internalin | Protein | 6e-73 | 41 |
