Gene Information

Name : LIV_2283 (LIV_2283)
Accession : YP_004856014.1
Strain : Listeria ivanovii PAM 55
Genome accession: NC_016011
Putative virulence/resistance : Resistance
Product : putative ABC-transporter ATP binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2428440 - 2429120 bp
Length : 681 bp
Strand : +
Note : Similar to ABC-transporter ATP binding proteins

DNA sequence : 
ATGGAAACTCTACTATCGTTTGAAAATGTCTATAAAGATTACCCGTCCGGTCCTTCAATTATTCACGCACTGAAGGAAAC
GAACTTTGAAGCAAAGAAAGGCGAGCTTATTGCGATTGTTGGCCCAAGTGGTTCTGGTAAAAGTACATTACTTTCTCTTG
CAGGTGCACTTTTAACACCTACTGGCGGAACTATTTCGATTAATGATAAGTCCATTAGTAATTTATCGGCAAAAGAGCAA
ACTTCGCTTCGTTTAGAAGAAATCGGCTTTATTTTCCAAGCTGCTCACCTTGTCCCTTACTTACGTGTGAAGGATCAAAT
TGGCTTTATTGGAAAAATGGCTGGGAAAAATGCTGCTGAATTAGAAAAAGAAGCTACTGCCTTGCTTGCTCAACTTGGAA
TTGCTGACCGGGCAAACGCTTTTCCAAAAGATTTATCAGGTGGGCAAAAGCAACGTGTCGCAATTGCTCGTGCACTTATT
AATCAGCCATCTGTTATTTTAGCGGATGAGCCAACTGCCAGCCTTGATACAGCAAGAAGTCGTGAAGTTGTGACGTTGCT
TCGTGATGAAGTAGTACAAACTAGCCGGACTGCGATTATGGTTACCCATGATGAACGGATGCTAGATTTAGTTAATCATG
TGTATCGTATGGAAGATGGCTTACTTACTCAAGAAAGTTAA

Protein sequence : 
METLLSFENVYKDYPSGPSIIHALKETNFEAKKGELIAIVGPSGSGKSTLLSLAGALLTPTGGTISINDKSISNLSAKEQ
TSLRLEEIGFIFQAAHLVPYLRVKDQIGFIGKMAGKNAAELEKEATALLAQLGIADRANAFPKDLSGGQKQRVAIARALI
NQPSVILADEPTASLDTARSREVVTLLRDEVVQTSRTAIMVTHDERMLDLVNHVYRMEDGLLTQES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAP55232.1 unknown Not tested SaPIbov2 Protein 7e-34 49
SARLGA251_00480 YP_005754062.1 ABC-type transport system ATPase Not tested Type-XI SCCmec Protein 3e-28 48

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LIV_2283 YP_004856014.1 putative ABC-transporter ATP binding protein CP001581.1.gene798.p Protein 1e-25 43
LIV_2283 YP_004856014.1 putative ABC-transporter ATP binding protein NC_008702.1.4606598. Protein 2e-23 42