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Name : pdp (LIV_1974) Accession : YP_004855719.1 Strain : Listeria ivanovii PAM 55 Genome accession: NC_016011 Putative virulence/resistance : Unknown Product : putative pyrimidine-nucleoside phosphorylase Function : - COG functional category : F : Nucleotide transport and metabolism COG ID : COG0213 EC number : - Position : 2084692 - 2085993 bp Length : 1302 bp Strand : - Note : Similar to pyrimidine-nucleoside phosphorylase DNA sequence : ATGAGAATGGTGGATATTATTTCCAAAAAGAGGGACGGTAAAGCTTTATCAACCGAAGAAATTCAGTTTTTCATTGATGG GTATACAAATGGGGAAATTCCAGATTATCAAGCAAGTGCTCTAGCCATGGCGATCTTTTTCCAAGATATGAATGATGAGG AGCGCGCCGATTTAACGATGGCGATGGTTGGTTCTGGTGACACAATCGATTTATCGGCTATTGAAGGAATCAAAGTCGAT AAACATAGTACAGGCGGTGTAGGCGATACTACAACACTCGTTCTTGCGCCACTTGTTGCTGCAGTCGGAGTTCCAGTTGC TAAAATGTCCGGACGTGGCTTAGGTCACACAGGTGGGACAATCGATAAGTTAGAGTCTATCAAAGGTTTTCATATTGAAC TAGATAAACAAGATTTCATTAATTTAGTGAATCGTGATAAAGTAGCAGTTATTGGCCAATCGGGCAATTTAACCCCTGCA GATAAAAAAATGTACGCGCTTCGTGATGTAACAGGAACAGTAAATTCGATTCCGTTAATCGCAAGCTCTATTATGAGTAA AAAAATTGCTGCTGGGGCAGATGCCATCGTACTTGATGTCAAAACAGGCGCAGGTGCATTTATGAAAACCGACGAAGATG CAGAAAAGCTAGCACATGCCATGGTTCGCATCGGTAATAACGTTGGCAGAAATACAATGGCAGTCATTTCTGATATGTCT CAACCACTTGGTGAAGCAATCGGAAACGCTTTAGAGGTAAAAGAAGCCATCGACACATTAAAAGGGCAAGGTCCAGAAGA CTTAACTGAATTAGTTCTTGTACTCGGAAGTCAAATGGTCGTGCTTGCTAAGAAAGCAGAAACGTTAGAGGAAGCTCGTG CTAAGCTCATCCAAGTAATCAAAAACGGAGCAGCATTAGAGAAATTTAAAACCTTCCTTTCGAACCAAGGTGGCGACGCA AGCATTGTTGACCATCCAGAAAAACTTCCGCAAGCAAAATACCAAATCGAAGTACCAGCAAAAACAGCTGGCTTTGTAAG TAAAATAGTTGCAGATGAAATCGGAATTGCCGCTATGATCCTAGGAGCTGGCCGTGCAACCAAAGAAGATGAAATTAATT TGGCAGTTGGTTTAATGTTACGTAAAAAAGTAGGCGACCCTGTCAAAGCGGGCGAATCACTCGTAACGATTTTTGCCGAC CAAGAAAATGTAGAAAACGTTAAAGCGAAGATCTATGAAAATATTGAAATCGCTGACCACGCAACAGCTCCAACGCTTGT TCATAAAGTAATCACAGAATAA Protein sequence : MRMVDIISKKRDGKALSTEEIQFFIDGYTNGEIPDYQASALAMAIFFQDMNDEERADLTMAMVGSGDTIDLSAIEGIKVD KHSTGGVGDTTTLVLAPLVAAVGVPVAKMSGRGLGHTGGTIDKLESIKGFHIELDKQDFINLVNRDKVAVIGQSGNLTPA DKKMYALRDVTGTVNSIPLIASSIMSKKIAAGADAIVLDVKTGAGAFMKTDEDAEKLAHAMVRIGNNVGRNTMAVISDMS QPLGEAIGNALEVKEAIDTLKGQGPEDLTELVLVLGSQMVVLAKKAETLEEARAKLIQVIKNGAALEKFKTFLSNQGGDA SIVDHPEKLPQAKYQIEVPAKTAGFVSKIVADEIGIAAMILGAGRATKEDEINLAVGLMLRKKVGDPVKAGESLVTIFAD QENVENVKAKIYENIEIADHATAPTLVHKVITE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| deoA | YP_005163381.1 | Thymidine phosphorylase | Not tested | Not named | Protein | 2e-69 | 47 |
