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Name : lysS (LIV_0198) Accession : YP_004854027.1 Strain : Listeria ivanovii PAM 55 Genome accession: NC_016011 Putative virulence/resistance : Virulence Product : putative lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : - Position : 219613 - 221109 bp Length : 1497 bp Strand : + Note : - DNA sequence : ATGAGTAACGAGAATCACGAAGAACTAAATGACCAACTCATCGTCCGCCGCGAAAAAGTAGAAACTTTGCGCGAAGAAGG AATTGATCCTTTTGGCGGAAAATTCATCCGTTCCATCAGCCCGGAAGAAATTGAAACCAAATTTGCTGATAAATCAAAAG AAGAACTTGAAGAAGCTTCTATTGAAGTAACTGTGGCAGGACGTATTATGACAAAACGTGTAAAAGGGAAAGTTGGTTTT ACACATATTCAAGATCGTTTCCACCAATTACAAATCTATATCCGCAAAGATGCCATTGGCGAAGACGCATATGCCATTTT CAAAATTGCTGATTTAGGAGATATTATCGGCATTAAAGGTACTATCTTTAGAACAAACACTGGCGAACTATCTGTGAAAG CAACAAAATTCACATTACTATCCAAATCATTGCGCCCACTTCCTGACAAATACCATGGCTTAAAAGATGTTGAACAACGC TATCGCCAACGCTATTTAGACTTAATTACCAATGAAGAAAGTCAAAATCGTTTTGTTATGCGGAGTAAAATTTTGAAATA TACACGTGATTACATGGATAATCAAGGTTTCTTAGAAGTTGAAACACCGGTATTGCATACAATTGCTGGTGGCGCTGCTG CGAAACCGTTTATTACTCATCATAATGCGCTGGATATGGAATTATACTTACGAATCGCGTTAGAACTACATTTAAAACGA CTAATTGTAGGTGGAATGGATAAAGTATACGAAATTGGCCGTGTATTCCGCAATGAAGGAACATCTACACGCCATAATCC GGAATTTACTATGCTGGAATCCTATGCTGCATATGAAGATTACAAAGATGTAATGGATTTAGTAGAAGGATTAGTTTCTA CTGTATGCGAGCAAGTTAATGGGACTACTAAGATAACATATGGTGAATATCATGTAGATCTAACACCTAACTGGCGTAGA ATTCACATGGCTGATGCTGTTAAAGAATATGTTGGAGTAGACTTTTGGAATGTAACTTCTGATGAAGAAGCTCATAGATT AGCCAAAGAACACAACGTACAGGTCACGAAACATATGACATACGGCCATATTCTTAACGAGTTTTTCGAAACGTTTGTTG AAGAAAAGCTGATTCAACCAACATTTGTGTATGGGCACCCAGTAGAAATATCTCCATTGGCTAAGAAGAACAAAGAAGAT GACCGGTTTACTGACCGCTTTGAATTATTTATTGTTGGTCGTGAACATGCTAATGCTTTCTCAGAATTAAATGATCCAAT CGACCAAAGAGAACGTTTTGAAGCGCAAATGAAAGAGCGGGAACAAGGAAATGATGAAGCACATGGAATGGATGCAGATT TCTTAGAAGCGCTAGAATATGGTTTACCGCCAACCGGTGGATTAGGAATAGGAATAGATCGTTTAGTAATGCTACTAACT GACGCACCATCTATACGCGATATTTTATTATTCCCAACAATGAAACACAGAGATTAA Protein sequence : MSNENHEELNDQLIVRREKVETLREEGIDPFGGKFIRSISPEEIETKFADKSKEELEEASIEVTVAGRIMTKRVKGKVGF THIQDRFHQLQIYIRKDAIGEDAYAIFKIADLGDIIGIKGTIFRTNTGELSVKATKFTLLSKSLRPLPDKYHGLKDVEQR YRQRYLDLITNEESQNRFVMRSKILKYTRDYMDNQGFLEVETPVLHTIAGGAAAKPFITHHNALDMELYLRIALELHLKR LIVGGMDKVYEIGRVFRNEGTSTRHNPEFTMLESYAAYEDYKDVMDLVEGLVSTVCEQVNGTTKITYGEYHVDLTPNWRR IHMADAVKEYVGVDFWNVTSDEEAHRLAKEHNVQVTKHMTYGHILNEFFETFVEEKLIQPTFVYGHPVEISPLAKKNKED DRFTDRFELFIVGREHANAFSELNDPIDQRERFEAQMKEREQGNDEAHGMDADFLEALEYGLPPTGGLGIGIDRLVMLLT DAPSIRDILLFPTMKHRD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 7e-105 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_004854027.1 | putative lysyl-tRNA synthetase | VFG1668 | Protein | 4e-105 | 47 |
