Gene Information

Name : LIV_1825 (LIV_1825)
Accession : YP_004855573.1
Strain : Listeria ivanovii PAM 55
Genome accession: NC_016011
Putative virulence/resistance : Resistance
Product : putative metal cations ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 1933186 - 1933902 bp
Length : 717 bp
Strand : -
Note : Similar to metal cations ABC transporter,ATP-binding proteins

DNA sequence :
ATGAATATTCAAGATTTAACGATAAGCTATAAACAAAAAGTGGCGATTGATCATGTATCGCTTCAAATAGCATCAGGCAA
ACTAACTGGTATCGTCGGTCCAAATGGAGCTGGAAAATCTACCTTACTAAAAGGGATGATGGGATTAATTCCACGTGAAA
ATGGTCAAGTAACGTTAGATGGAAAGCCACTTGCTTTTTGGCGGAAACGCATCGCTTATGTTCCGCAAAGAAGCGAAGTG
GATTTAACTTTTCCAATTACAGTTTTAGATATGGTTATACTCGGAACGTATCCGGCACTTGGGTTAATTAAACGCCCAGG
AAAAAAAGAAAAACAACTGGCGTTAGACGCGCTAGAACAAGTGGAAATGACTGCTTTTCAGAAGCGACAAATTGGCGAAC
TTTCTGGTGGGCAATTGCAACGTGTTTTTATTGCCAGAGCTTTAGCACAACATGCAGAAATTTTCTTTTTAGATGAACCT
TTTGCTGGGATTGATATGACGAGTGAAGCGTTAATTATGCAGTTATTAAAAAAATTAAGAGATAACGGAAAAACGATTGT
CGTTGTCCACCATGATTTCCATAAAGTAGCTGCTTATTTTGATGATATTATTTTACTTAATAAAAAACTAATCGCACATG
GTCCAGTGGAACTAACATTTACAGAAGACAAAATAAAATATGCTTATGGTGATTTAACATTTGCAAAAGGAGTTTAA

Protein sequence :
MNIQDLTISYKQKVAIDHVSLQIASGKLTGIVGPNGAGKSTLLKGMMGLIPRENGQVTLDGKPLAFWRKRIAYVPQRSEV
DLTFPITVLDMVILGTYPALGLIKRPGKKEKQLALDALEQVEMTAFQKRQIGELSGGQLQRVFIARALAQHAEIFFLDEP
FAGIDMTSEALIMQLLKKLRDNGKTIVVVHHDFHKVAAYFDDIILLNKKLIAHGPVELTFTEDKIKYAYGDLTFAKGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0575 NP_814340.1 cationic ABC transporter ATP-binding protein Not tested Not named Protein 1e-55 51
ef0093 AAM75296.1 EF0093 Not tested Not named Protein 9e-56 51

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LIV_1825 YP_004855573.1 putative metal cations ABC transporter ATP-binding protein BAC0400 Protein 4e-59 54
LIV_1825 YP_004855573.1 putative metal cations ABC transporter ATP-binding protein BAC0440 Protein 2e-45 42