Gene Information

Name : LIV_1823 (LIV_1823)
Accession : YP_004855571.1
Strain : Listeria ivanovii PAM 55
Genome accession: NC_016011
Putative virulence/resistance : Virulence
Product : putative adhesion binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0803
EC number : -
Position : 1931415 - 1932344 bp
Length : 930 bp
Strand : -
Note : Similar to adhesion binding proteins and lipoproteins with multiple specificity for metal cations (ABC transporter)

DNA sequence :
ATGAAAAAGCTGATTTTTGCAGCATTAGTTATGCTAGTAGTGGTGCTTGCAGGATGTAGTTCAGGAAATAAAGAAACGGT
CAAGGATGGAAAATTAAATGTGGTTGCGACCTATTCGATTTTAGCAGATATCGTCAAAAATGTTGGTGGAGAAAAAATTG
AATTGCATAGTATTGTGCCAGTGGGCGTAGATCCACATGAATATGACCCACTACCTGCAAATATTCAAAGCGCTGCTGAC
GCCGATTTGATTTTTTATAACGGTTTGAATTTGGAAACGGGGAATGGCTGGTTTGATCGGATGTTAGAAACAGCAGACAA
ATCACGAGAGGATAAAGATCAAGTGATAGAGTTAAGTAAAGGTGTGAAACCAAAATACTTAACGGAGAAAGGCAAAACAT
CAGAAACAGATCCTCATGCATGGTTAGACCTTCATAATGGGATTATTTATACAGAAAATGTCCGAGATGCGCTGATTAAA
GCAGATCCAGACAATGCTGATTATTATAAAGAACATGCAAAAAAATACATCACAAAACTAGCAAATCTGGACAAAGAAGC
GAAACAAAAGTTTGCAGATTTACCAGAAAATCAAAAAACTTTAGTAACGAGTGAGGGGGCATTTAAATATTTTGCTGCTA
GGTATGGTTTGAAAGCTGCTTATATTTGGGAAATTAACACAGAAAGCCAAGGGACCCCTGAGCAAATGAAACAAATAGTT
GGCATCGTGGAAAACGAACATGTGCCAAATTTATTTGTCGAAACAAGTGTGGATCCTAGAAGTATGGAAAGTGTGTCTAA
AGAAACCGGTGTACCAATCTTCGCGAAAATATTCACTGATTCCACTGCCAAAAAAGGCGAGGTAGGCGACACGTATTTAG
AGATGATGCGTTACAATTTAGATGAAATTCATGATGGACTTGCAAAATAA

Protein sequence :
MKKLIFAALVMLVVVLAGCSSGNKETVKDGKLNVVATYSILADIVKNVGGEKIELHSIVPVGVDPHEYDPLPANIQSAAD
ADLIFYNGLNLETGNGWFDRMLETADKSREDKDQVIELSKGVKPKYLTEKGKTSETDPHAWLDLHNGIIYTENVRDALIK
ADPDNADYYKEHAKKYITKLANLDKEAKQKFADLPENQKTLVTSEGAFKYFAARYGLKAAYIWEINTESQGTPEQMKQIV
GIVENEHVPNLFVETSVDPRSMESVSKETGVPIFAKIFTDSTAKKGEVGDTYLEMMRYNLDEIHDGLAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0577 NP_814342.1 adhesion lipoprotein Virulence Not named Protein 8e-77 53
ef0095 AAM75298.1 EF0095 Not tested Not named Protein 6e-77 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LIV_1823 YP_004855571.1 putative adhesion binding protein VFG2157 Protein 4e-128 93
LIV_1823 YP_004855571.1 putative adhesion binding protein VFG2165 Protein 8e-81 59
LIV_1823 YP_004855571.1 putative adhesion binding protein VFG1359 Protein 1e-79 53