Gene Information

Name : prfA (LIV_0170)
Accession : YP_004854003.1
Strain : Listeria ivanovii PAM 55
Genome accession: NC_016011
Putative virulence/resistance : Virulence
Product : putative listeriolysin positive regulatory protein
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0664
EC number : -
Position : 185724 - 186437 bp
Length : 714 bp
Strand : -
Note : -

DNA sequence :
ATGGACGCTCAAGCAGCAGATTTCAAAAATTTTTTAGAAACTAACGGCATTAAACCAAAAAAATTCAAGAAAAAAGACAT
TATTTTTAATCAATGGGACCCACAAGAATATTGTGTATTCCTATACGACGGGATTGCAAAACTTACCAACATTAGCGAAA
ATGGAAGCATCATGAATTTACAATATTACAAAGGAGCTTTCATCATCATGTCTGGTTCCCTTGATACAGGAAAACCATTA
GGCTACTATAATCTAGAAGTAATTAGTAAAACAGCCACTGCCTATGTACTCAAAATAAGCGATTTAAAAAATTTGGTTAG
CTCAGATATCACGCAGCTTTTTTACATTATCCAAGCTTTGCAAAAGCAAGTTTCATACAGTTTAGCTAAGTTCAATGATT
TTTCTGTTAATGGGAAGCTAGGTTCTATTTGCGGACAGCTTTTAATACTAACTTATGTATATGGCGAAAAAAATCCTGAT
GGCATCAAAATTGCCCTTGATAACCTCACTATGCAAGAATTAGGTTATTCAAGTGGAATAGCACATTGTTCGGCTGTTAG
CAGAATTCTTTCAAAACTAAAAAAAGAAAAAGTTATCGAATATAAACATTCATCTTTTTATGTACAAAATCTTGATTACC
TAAAAAAAATTGCCCCTAAACTTGACGAATGGTTCTATCTAGCATGTCCTAGTTCATGGGAAAAATTCAATTAA

Protein sequence :
MDAQAADFKNFLETNGIKPKKFKKKDIIFNQWDPQEYCVFLYDGIAKLTNISENGSIMNLQYYKGAFIIMSGSLDTGKPL
GYYNLEVISKTATAYVLKISDLKNLVSSDITQLFYIIQALQKQVSYSLAKFNDFSVNGKLGSICGQLLILTYVYGEKNPD
GIKIALDNLTMQELGYSSGIAHCSAVSRILSKLKKEKVIEYKHSSFYVQNLDYLKKIAPKLDEWFYLACPSSWEKFN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
prfA CAA51231.1 Listeriolysin regulatory protein Virulence LIPI-1 Protein 2e-100 99
prfA CAA05714.1 PrfA Virulence LIPI-1 Protein 3e-86 79

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
prfA YP_004854003.1 putative listeriolysin positive regulatory protein VFG0072 Protein 2e-86 79