Gene Information

Name : LIV_1380 (LIV_1380)
Accession : YP_004855137.1
Strain : Listeria ivanovii PAM 55
Genome accession: NC_016011
Putative virulence/resistance : Unknown
Product : putative glycine betaine/carnitine/choline ABC transporter ATP binding protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1125
EC number : -
Position : 1442342 - 1443328 bp
Length : 987 bp
Strand : +
Note : Similar to glycine betaine/carnitine/choline ABC transporter (ATP-binding protein)

DNA sequence : 
ATGATTCGTTTTGACAGTGTATCTAAAAATTATAATAATGATAAAACTGCTGTGAAGAATGTGACACTTGACATAAAAGA
TGGCGAATTCTTCGTTTTCATCGGACCAAGTGGTTGCGGGAAAACAACAACACTCAAAATGATTAACCGATTGATTCCTT
TAACGACAGGAACAATCTATATCAATGAAAAAAGAATTAGCGATTACGATATTCATGAACTTCGCTGGGATATCGGTTAT
GTTTTGCAACAAATTGCTCTATTTCCCCATATGACCATAGAAGAAAATATTGCAATTGTGCCAGAACTGAAAAAATGGGA
TAAAGAAAAAATTCATGCTCGGATTACCGAGTTATTAGATAGCGTTGGACTTGATCCGGAAAGCTATCGCCACCGTAAAC
CAGCGGAACTATCTGGAGGAGAGCAACAACGAGTTGGAGTAGTTCGCGCGCTCGCGGCTGACCCTGGAATTATTTTAATG
GATGAACCTTTCAGCGCACTGGATCCCATTTCAAGGCAACGACTTCAACAAGATATTTCGGCACTTCAAAAGAAAATCAA
AAAAACGATTGTCTTTGTAACCCATGATATGCAAGAAGCACTTGCTCTTGGTGACCGAATTTGCGTGATGCAAGAAGGCG
AAATTGTTCAAGTCGCTACACCACAAGAAATTATTAAAAACCCAGAGAATGATTTTGTTAAAGATTTCTTAGCTTCTGGT
CATGCTTTTAATACACCCATTTTAGAAGGTAGTTTTACAGTGAATGATTTAATAGAAGCAGATTTATTTTATGACTACCA
AACGAGCGACGGAACTCTTGGCATTTCTTTAAAAGAGCCGGTGGAGAATTTAATACGTCGTGTGGCGGAGGAACAATCTA
TTCCTGTTCTAAATGAAGCTTCGGGCAAATTCGTCGGAACCATTACAAATAAGCATGTAATGCAATTCTTAGCGCGCCAC
CTAGAAAGTTCAGGTGAGCTAGTATGA

Protein sequence : 
MIRFDSVSKNYNNDKTAVKNVTLDIKDGEFFVFIGPSGCGKTTTLKMINRLIPLTTGTIYINEKRISDYDIHELRWDIGY
VLQQIALFPHMTIEENIAIVPELKKWDKEKIHARITELLDSVGLDPESYRHRKPAELSGGEQQRVGVVRALAADPGIILM
DEPFSALDPISRQRLQQDISALQKKIKKTIVFVTHDMQEALALGDRICVMQEGEIVQVATPQEIIKNPENDFVKDFLASG
HAFNTPILEGSFTVNDLIEADLFYDYQTSDGTLGISLKEPVENLIRRVAEEQSIPVLNEASGKFVGTITNKHVMQFLARH
LESSGELV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 3e-50 47
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 2e-50 47