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Name : tkt (LIV_1256) Accession : YP_004855024.1 Strain : Listeria ivanovii PAM 55 Genome accession: NC_016011 Putative virulence/resistance : Unknown Product : putative transketolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : - Position : 1311579 - 1313573 bp Length : 1995 bp Strand : + Note : Highly similar to transketolase DNA sequence : TTGTTCGATAACACAGATACTTTAGCAGTGAATACAATTCGTACATTATCAATTGATGCAATTCAAAAAGCAAATTCTGG TCATCCAGGATTACCTATGGGAGCAGCACCAATGGCCTACGCGTTATGGTCTCGCGTATTAAATACCAACCCGAAAAATT CCCACTGGTTTAACCGTGACCGCTTTGTACTTTCTGCAGGACATGGTTCAATGCTTTTATATAGTTTGCTACATTTAAGT GGTTTCAAATTAGAATTAGAAGATTTGAAAAACTTCCGTCAATGGGAAAGCAAAACTCCAGGACATCCGGAATATCGTTA TACGGATGGAGTAGATGCAACAACAGGCCCACTTGGTCAAGGAATCGCAATGGCAGTTGGTATGGCAATGGCAGAACGTC ATTTAGAAGCGAAGTATAATAAAGATGGTTTTAATGTAGTAGATCATTATACTTATGCACTATGTGGTGATGGGGACTTA ATGGAAGGTGTTGCTTCTGAAGCGGCTTCTTATGCTGGTCACCAACAATTAGGTCGACTTGTACTATTATATGATTCCAA CGATATTTCACTTGATGGTGATTTAGATAAATCTTTCTCAGAAAATGTGAAACAACGATTTGAAGCGTATGGTTGGGAAC ATTTACTTGTAAAAGATGGTAATGATACAGCGGAAATTTTAGCAGCAATCGAAAAAGCAAAACAAAATACATCACAACCA ACAATGATTGAAGTAAAAACCGTGATTGGTTTTGGTGCCCCAAATGAAGGTACTAGCAAAGTGCATGGTGCTCCATTAGG AGAAGAAGGTATACTAGCGGCGAAAAAAGCATATGGCTGGAACTATGAAGAAAAATTCTTTGTTCCTGAAGAAGTAACTG CTCGCTTTAAAGAAACGATTGGGAAACGTGGTGAGAAAGCAGAAGCAGCTTGGAATGAATTATTTGCTTCTTATAAAGCA AAATATCCGGAGCTTGCTAAACAATTAGAAGATAGTTTGAATAATAAATTACCAGCTGATTGGGATGCTGAGTTACCAGT GTATGACGATTCAAAAGCATTAGCTAGCCGGGCTTCCAGTGGAGAAGTAATCAATGCGCTAGCTGCGAAAGTACCGACTC TATTCGGTGGTTCTGCTGACCTTGCTGGTTCTAATAATACAACGATTAAAACAGACGGCGAATTTACAAAAGCAACGCCA GCTGAACGTAACATTTGGTTTGGAGTTCGTGAATTTGCAATGGGCGCTGCTCTAAATGGTATGGCTCTTCATGGTGGTTT ACAAGTTTATGGTGGAACATTCTTTGTCTTCTCGGATTATGTTCGTGCAGCAATTCGTTTATCGGCAATTCAACATTTAC CTGTAACTTACGTAATGACGCATGACAGTATTGCGGTAGGAGAAGATGGACCAACTCACGAACCTATCGAGCAATTAGCT AGTTTGCGTGCAATGCCAGGACTTTCTGTTATTCGTCCTGCTGATGGAAATGAAGTAGTAGAAGCTTGGAAATTAGCGAT TACAGCTACTTCCACTCCGCATGTGCTTGTACTTACTCGTCAAGGGTTACCAACATTACCAAATTCTGCTAAATTAGCTG CAGAAGGCGTTAAAAAAGGTGCTTATGTCATCTCACCAGCTACAAAAGAACAGCCAGATGCAATCATTCTTGCAAGTGGT TCTGAAGTAAACTTGGCTGTTGAAGCTCAAAAAGAACTTCTAGCCGGGGGAACTGATGTATCTGTTGTAAGTGTGCCTTC ATTTGATCTATTTGAACAACAATCAGCAGAATATAAAGAAAGTGTTTTACCAAATGCTGTAAGAAAACGTGTAGCAGTGG AAATGGGCGCTAGCTTTGGCTGGGAACGCCATGTTGGTTTAGATGGAAAAGTAATTGGAATCGACAAGTTTGGTGCATCA GCTCCAGGAGAAACAGTGATTCATAATTATGGCTTTACGGTAGAAAATGTTGTAAATACAGTGAAATCACTTTAA Protein sequence : MFDNTDTLAVNTIRTLSIDAIQKANSGHPGLPMGAAPMAYALWSRVLNTNPKNSHWFNRDRFVLSAGHGSMLLYSLLHLS GFKLELEDLKNFRQWESKTPGHPEYRYTDGVDATTGPLGQGIAMAVGMAMAERHLEAKYNKDGFNVVDHYTYALCGDGDL MEGVASEAASYAGHQQLGRLVLLYDSNDISLDGDLDKSFSENVKQRFEAYGWEHLLVKDGNDTAEILAAIEKAKQNTSQP TMIEVKTVIGFGAPNEGTSKVHGAPLGEEGILAAKKAYGWNYEEKFFVPEEVTARFKETIGKRGEKAEAAWNELFASYKA KYPELAKQLEDSLNNKLPADWDAELPVYDDSKALASRASSGEVINALAAKVPTLFGGSADLAGSNNTTIKTDGEFTKATP AERNIWFGVREFAMGAALNGMALHGGLQVYGGTFFVFSDYVRAAIRLSAIQHLPVTYVMTHDSIAVGEDGPTHEPIEQLA SLRAMPGLSVIRPADGNEVVEAWKLAITATSTPHVLVLTRQGLPTLPNSAKLAAEGVKKGAYVISPATKEQPDAIILASG SEVNLAVEAQKELLAGGTDVSVVSVPSFDLFEQQSAEYKESVLPNAVRKRVAVEMGASFGWERHVGLDGKVIGIDKFGAS APGETVIHNYGFTVENVVNTVKSL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 3e-143 | 49 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 2e-148 | 48 |
