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Name : LIV_1251 (LIV_1251) Accession : YP_004855019.1 Strain : Listeria ivanovii PAM 55 Genome accession: NC_016011 Putative virulence/resistance : Resistance Product : putative arsenic efflux pump protein Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1055 EC number : - Position : 1308124 - 1309419 bp Length : 1296 bp Strand : + Note : Similar to arsenic efflux pump protein DNA sequence : ATGCAAGTCACATTAGCTATTTTAGTTTTTATTATTACATTAGTATTTGTTATTTGGCAACCTAAAAAACTATCGATTGG TTGGTCTGCGTGTGGTGGTGCTTTACTTGCGTTGCTATTTAGGGTCGTTACTTTTAAAGATATTGGAACAGTGACAGGAA TTGTTTGGAATGCAACACTCGCATTTATAGCGATTATTATTATTTCGCTTATTTTAGATGAAATTGGTTTTTTTGAATGG GCGGCTTTACATATGGCAAGCCTTGCTCGAGGGAATGGTTTATTGTTATTTGTCTTAATATCCATTTTAGGTGCTCTAGT CGCGGCTTTCTTTGCAAACGATGGCGCCGCATTAATTCTGACACCGATAGTCTTAGCAATGGTACGAGCGCTCCAATTTG ATGAGCTAAAAGTGTTTCCGTTTATTATCGCTAGTGGTTTTATTGCGGATACAACCTCTTTACCACTCGTTGTGAGTAAC TTGGTAAATATTGTATCAGCAGATTTTTTTGGTATTACTTTTTCTGAGTATGCACTTATGATGTGGATTCCGACACTTTT TTCGCTAATAGCTAGTATTTTGATTCTCTATATTTATTTTCGAAAAGCATTACCGAAAAAATATGACGATTCAGATCTTA AAGTACCCGAATCAGCATTAAAGGACAAGAAAATGTTTCATATATCTTGGTGGATATTAACCACCCTTGTTATTGGTTAT TTTTTAAGTAGTTTTTTGGAAATCCCAGTTTCTTTTATTGCATTATCTGTAGCGGCTATCTTTTTATTATTAGGCGGAAG GAGTCAGGCTGTAGCCACGAAAGCCATTTTAAAAGAGGCGCCTTGGAATATTGTCTTTTTCTCTGTTGGGATGTATATCG TTGTATACGGTTTGCAAAATGTAGGGATTACTAAATTATTATCTCATGCAGTTGAATATGTAGCGAGTTACGGTTTGTTC GTAGGTACAATTGGGATGGGGGCTATTGCAGCGCTCTTATCATCAGTTATGAATAATTTGCCGACAGTGATGATTAATGC ACTAGCGATTGACCATACACCTTTTACGGGAGTTATGAAAGAGGCATTAGTTTATGCTAATGTAATTGGTTCAGATTTAG GACCAAAGATTACGCCGATCGGCTCACTTGCCACATTGTTATGGCTCCATGTTTTAGCGCAGAAGGATATCAAGATAAGT TGGGGGTTATATTTTAAAATTGGAATTGTTATAACAATTCCAGTGCTTTTTATCACATTAGTTGGTCTATACTTGTCTTT ATTGCTTTGGAATTAA Protein sequence : MQVTLAILVFIITLVFVIWQPKKLSIGWSACGGALLALLFRVVTFKDIGTVTGIVWNATLAFIAIIIISLILDEIGFFEW AALHMASLARGNGLLLFVLISILGALVAAFFANDGAALILTPIVLAMVRALQFDELKVFPFIIASGFIADTTSLPLVVSN LVNIVSADFFGITFSEYALMMWIPTLFSLIASILILYIYFRKALPKKYDDSDLKVPESALKDKKMFHISWWILTTLVIGY FLSSFLEIPVSFIALSVAAIFLLLGGRSQAVATKAILKEAPWNIVFFSVGMYIVVYGLQNVGITKLLSHAVEYVASYGLF VGTIGMGAIAALLSSVMNNLPTVMINALAIDHTPFTGVMKEALVYANVIGSDLGPKITPIGSLATLLWLHVLAQKDIKIS WGLYFKIGIVITIPVLFITLVGLYLSLLLWN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SH0109 | YP_252024.1 | arsenical pump membrane protein | Not tested | SCCmec | Protein | 2e-111 | 66 |
| arsB | YP_005754065.1 | arsenical pump membrane protein | Not tested | Type-XI SCCmec | Protein | 3e-105 | 65 |
| arsB | YP_252017.1 | arsenical pump membrane protein | Not tested | SCCmec | Protein | 2e-103 | 64 |
| arsB2 | YP_001007633.1 | arsenical pump membrane protein | Not tested | YAPI | Protein | 1e-86 | 57 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| LIV_1251 | YP_004855019.1 | putative arsenic efflux pump protein | BAC0575 | Protein | 7e-108 | 65 |
| LIV_1251 | YP_004855019.1 | putative arsenic efflux pump protein | BAC0574 | Protein | 9e-106 | 65 |
| LIV_1251 | YP_004855019.1 | putative arsenic efflux pump protein | BAC0578 | Protein | 9e-87 | 58 |
| LIV_1251 | YP_004855019.1 | putative arsenic efflux pump protein | BAC0576 | Protein | 1e-87 | 58 |
| LIV_1251 | YP_004855019.1 | putative arsenic efflux pump protein | BAC0031 | Protein | 1e-84 | 56 |
| LIV_1251 | YP_004855019.1 | putative arsenic efflux pump protein | BAC0577 | Protein | 6e-87 | 56 |
