|
Name : clpY (LIV_1232) Accession : YP_004855003.1 Strain : Listeria ivanovii PAM 55 Genome accession: NC_016011 Putative virulence/resistance : Unknown Product : putative ATP-dependent Clp protease-like protein Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1220 EC number : - Position : 1286920 - 1288329 bp Length : 1410 bp Strand : + Note : Highly similar to ATP-dependent Clp protease-like proteins DNA sequence : TTGACAAATCAAATGCTAACGAGCCAGTTAACACCTAAACAAATTGTCGAAAAACTGGATCAATATATTATTGGACAAAC CGGCGCTAAAAAATCAGTCGCGGTAGCACTACGAAATCGGTATCGCAGACAACTTATGGATGAAACCATTCGTGATGAAA TCATTCCGAAAAACATTTTGATGATTGGACCAACAGGAGTCGGAAAAACAGAAATTGCTCGTCGGATTGCCAAAATTGTT CGAGCGCCATTTTCAAAAGTAGAAGCAACTAAATTTACAGAAGTAGGCTATGTTGGTCGCGATGTAGAATCTATGGTTCG TGATTTAGTAGAGGTTTCTGTTCGTTTAGTCAAAGAAGAAAAAATGCAACTAGTGCGTGTCAAAGCAGAAAAAAATGCTG AAAAACGCCTTATTAAATTATTAGCACCAAGTCAAAAGAAAAAACAAACGACGTCCCCAAATCCAATAGAAGCCCTATTC GGAGGGATGAATCATCAGGAAGAACCTGTTGATGAAGAAGTGGATCAAGAATTAAAAAATAAACGCAGCCAAATCGAATG GCGTCTTCAAAACGGTGAACTTGATGATGAAATTGTGACAGTGGAAGTAAAAGAACAACAAAATCCAATGTTAGATATGA TGCGCGGGGCTGGAATGGACCAAATGAATGGCATGCAAGATGCGCTTTCAGGAATGTTCCCAGCGAAGAAGAAAAAGCGA AAAGTTGCTGTTCGAGAAGCGAAAAAAATTCTTTTTGAAGATGAAGCATCGAAACTTATAGATTCAGAAGAATTAGCTGC AGAAGGAATTCATCGTGCAGAACAAATGGGCATGATTTTTATTGATGAAATTGATAAAATTGCCAGCAAAGAAGGCGGCG GAAATGCTCAGGTTTCTAGAGAAGGTGTTCAAAGAGACATTTTGCCTATCGTTGAGGGGTCGCAAATTTCTACTAAATAT GGTACAGTCAACACGGAGTACATTTTGTTCATTGCAGCTGGAGCTTTCCATATGTCGAAGCCGAGCGATTTAATTCCTGA ACTTCAAGGGCGCTTTCCAATTAGAATTGAACTAGATAAATTAACCCAAGAAGATTTCTACAAGATTCTCACTGAGCCGG ACAATGCGCTTATTAAACAATACAAAGCCCTACTTAAAACTGAGGGAATTGATTTGGTTTTCACCAAAGAAGCTGTCGAG CGAATTGCAGAAATTGCTTTCCAAGTGAATCAAGATTCTGATAATATTGGAGCAAGAAGACTTCATACCATTTTGGAAAA ACTACTGGAAGATTTGCTTTTTGAGGCTCCGGAAATTAATATGGAATCAGTGAAAGTAACAGAAAACTATGTAAATGAAA AACTTGCGCCAATCATGAAAAACAGAGATTTAACTCAATTTATTTTATAA Protein sequence : MTNQMLTSQLTPKQIVEKLDQYIIGQTGAKKSVAVALRNRYRRQLMDETIRDEIIPKNILMIGPTGVGKTEIARRIAKIV RAPFSKVEATKFTEVGYVGRDVESMVRDLVEVSVRLVKEEKMQLVRVKAEKNAEKRLIKLLAPSQKKKQTTSPNPIEALF GGMNHQEEPVDEEVDQELKNKRSQIEWRLQNGELDDEIVTVEVKEQQNPMLDMMRGAGMDQMNGMQDALSGMFPAKKKKR KVAVREAKKILFEDEASKLIDSEELAAEGIHRAEQMGMIFIDEIDKIASKEGGGNAQVSREGVQRDILPIVEGSQISTKY GTVNTEYILFIAAGAFHMSKPSDLIPELQGRFPIRIELDKLTQEDFYKILTEPDNALIKQYKALLKTEGIDLVFTKEAVE RIAEIAFQVNQDSDNIGARRLHTILEKLLEDLLFEAPEINMESVKVTENYVNEKLAPIMKNRDLTQFIL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hslU | YP_003728753.1 | heat shock protein HslU | Not tested | cag PAI | Protein | 2e-91 | 48 |
