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Name : LIV_1207 (LIV_1207) Accession : YP_004854979.1 Strain : Listeria ivanovii PAM 55 Genome accession: NC_016011 Putative virulence/resistance : Unknown Product : putative alpha,alpha-phosphotrehalase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0366 EC number : - Position : 1261615 - 1263261 bp Length : 1647 bp Strand : - Note : Similar to alpha,alpha-phosphotrehalase DNA sequence : ATGACAACTTTTGCTCAAAAAACAATTTATCAAGTTTATCCAAAATCTTTTTTTGATACAGATGGTGACGGGATTGGCGA TATTCCTGGAATCACTGCTAAACTTGATTATCTACAAAAATTAGGGGTTGAAATGATTTGGATTAATCCATTTTATCCTT CCCCTCAAAATGATAACGGTTATGACATAGCCGACTATACAGCTGTTGATCCGTTGTTTGGAACGATGCATGATGTTTCT ACTCTGATTCGTGAAGGAAAAAAAAGAAACATTGGAATTATGATTGATTTAGTACTTAATCATACTTCTACTGAACATCC TTGGTTTCAAAAGGCTTTGGCGGGTGATCCATTTTACCGTGACTTCTATTTTTTCCGTGAAGGTAAGAGAGACGGCACTC CTCCAACAAACTGGGAATCCAAATTTGGTGGTAATGCTTGGGAAAAATTACCCAATTCGGCAGAGTACTACTTGCATTTA TATGATGTCACACAAGCTGATTTGAACTGGGAAAATCCTAATGTCCGGGATGCACTTTATGATGTAGTTAATTTTTGGAT TGATAAAGGTGTGGAAGGTTTCCGACTAGATGTCCTTAATGTTATTTCGAAACCTAAATTTTTAGAAGATGATTTTGAAG GTGATGGCAGACGTTTCTATACGGATGGTCCTAAAATTCACACTTATTTAAAGGAACTACATGAACGCACTTTTGGTGAA AAACCAATTATTACTGTTGGCGAGATGTCGTCTACTGATATCGCTAATTGTGTTCGCTATAGTAATCCGGAAGAAAAAGA ATTATCCATGGTATTTCATTTTCATCATCTGAAAGTAGATTATCCAAATGGTGAAAAATGGCGTTTAGGGGAAATGAATT TTGCAACTTTAAAATCTATTTTCCATACATGGCAAGTAGCTATGTCTGAGGAAAACGGTTGGGATGCGCTGTTTTGGAAT AATCACGATCAGCCAAGAGCTCTGGGGCGATTTGTCTCTGATTCGCCTGCACATAATTATCATGCCGCTACCCTACTTGC TGCAACAACTCATTTTATGCGTGGTACTCCGTTTATTTACATGGGCGAAGAAATTGGGATGATGAATCCAAAATTCCCTA CGATTAATGATTATGTTGATATTGAAACTCTAAATCATTTCGATATTTTACAACAACAAGGATTTTCTGAAGCAGAAGTA ATGGCGATTATTAAAGAACGCTCCCGTGATAATAGCCGCACACCAATGCAATGGGATAATACTGAAAATGCAGGTTTTAC AACTGGAAAACCTTGGCTAAAAGTAGCAGAAAATGCAAGTGAAATTAATGCTCAGCAAGCTTTACAAACGAAAACAAGTA TTTTCTATTTTTACCAAAGATTAATAGCTCTACGGAAAGAATATCCTGTCATTCAAAATGGCGATTATACACCTACTCTT ACGGATGAAGATTCTGTTATCGCTTATACACGTTCGCTTGAAGATTCTAAGCTACTCTCGATTCACAACTTTGCTTTAGA AAAGCAGATTTTAACGCTTCCAAGTGAATTCTCAAATGCTAAAATCTTACTTTCTAACTATCAGCGGGAAGAGCTTAATT CGACCATAGAGCTTTCTCCTTACGAAACACTAACTTTACTTCAATAA Protein sequence : MTTFAQKTIYQVYPKSFFDTDGDGIGDIPGITAKLDYLQKLGVEMIWINPFYPSPQNDNGYDIADYTAVDPLFGTMHDVS TLIREGKKRNIGIMIDLVLNHTSTEHPWFQKALAGDPFYRDFYFFREGKRDGTPPTNWESKFGGNAWEKLPNSAEYYLHL YDVTQADLNWENPNVRDALYDVVNFWIDKGVEGFRLDVLNVISKPKFLEDDFEGDGRRFYTDGPKIHTYLKELHERTFGE KPIITVGEMSSTDIANCVRYSNPEEKELSMVFHFHHLKVDYPNGEKWRLGEMNFATLKSIFHTWQVAMSEENGWDALFWN NHDQPRALGRFVSDSPAHNYHAATLLAATTHFMRGTPFIYMGEEIGMMNPKFPTINDYVDIETLNHFDILQQQGFSEAEV MAIIKERSRDNSRTPMQWDNTENAGFTTGKPWLKVAENASEINAQQALQTKTSIFYFYQRLIALRKEYPVIQNGDYTPTL TDEDSVIAYTRSLEDSKLLSIHNFALEKQILTLPSEFSNAKILLSNYQREELNSTIELSPYETLTLLQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 2e-105 | 43 |
