Gene Information

Name : LIV_1025 (LIV_1025)
Accession : YP_004854809.1
Strain : Listeria ivanovii PAM 55
Genome accession: NC_016011
Putative virulence/resistance : Virulence
Product : putative UDP-glucose pyrophosphorylase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1210
EC number : -
Position : 1083774 - 1084661 bp
Length : 888 bp
Strand : -
Note : Similar to putative UDP-glucose pyrophosphorylases

DNA sequence :
ATGAAAGTAAAAAAAGCAGTTATTCCAGCAGCAGGATTAGGGACTAGATTTCTTCCAGCTACAAAAGCAATGCCAAAAGA
AATTCTGCCAATCGTGGACAAACCCACCATTCAATATATTGTAGAAGAAGCTGTTGAGTCAGGAATTGAAGATATTCTAA
TTGTTACAGGTAAAGGCAAACGAGCTATCGAGGATCATTTCGATTCTGTTCCTGAGCTTGAATCCAATTTACGTGAAAAA
AACAAATTAGAATTACTACATTTAATTGAAGAAACAACGAATATTAATCTTCACTTCATTCGTCAATCTAAGCCTAAAGG
CCTTGGTGATGCGATTCTTCAAGCAAGAGGGTTTGTTGGTAATGAGCCATTTATCGTTATGTTAGGTGATGATATTGTTC
AAGCCAAAACACCTTGTGCGAAACAATTAATCCAACAATATGAAAAAACACATAGTTCTATTATCGGTGTTCAAACTGTC
CCTCATGAAGATACATATCGTTATGGTATTATTGATCCAATCGATGAGTACAGCAAAGACTTATACAATGTCAATGGTTT
TGTAGAAAAGCCTGATCCAAGCTCAGCGCCATCAGACCTTGCTATTCTAGGTCGGTATTTACTAACACCACAGATTTTTG
ATTTTCTTGAAACACAAAAACCAGGCGCTGGCGGTGAAATTCAACTAACTGATGCTATCAACAGTTTAAATGAGATTCAA
CGCGTTTTCGCTTATGACTTCGAAGGGGAACGTTTTGATGTTGGCGATAAATTTGGTTTTATCAAAACGACCATGCAATT
TGCTTTAAAACATCCGGAAATTAAAGATGATGTGGCCAAATTAGTAGATCAGCTTTATGCAGAAATTCACGCTAAAGATA
AGAAATAA

Protein sequence :
MKVKKAVIPAAGLGTRFLPATKAMPKEILPIVDKPTIQYIVEEAVESGIEDILIVTGKGKRAIEDHFDSVPELESNLREK
NKLELLHLIEETTNINLHFIRQSKPKGLGDAILQARGFVGNEPFIVMLGDDIVQAKTPCAKQLIQQYEKTHSSIIGVQTV
PHEDTYRYGIIDPIDEYSKDLYNVNGFVEKPDPSSAPSDLAILGRYLLTPQIFDFLETQKPGAGGEIQLTDAINSLNEIQ
RVFAYDFEGERFDVGDKFGFIKTTMQFALKHPEIKDDVAKLVDQLYAEIHAKDKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0059 YP_300149.1 UTP-glucose-1-phosphate uridylyltransferase Not tested SCC15305cap Protein 5e-86 64

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LIV_1025 YP_004854809.1 putative UDP-glucose pyrophosphorylase VFG0964 Protein 6e-95 66