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Name : PdhD (LIV_1000) Accession : YP_004854784.1 Strain : Listeria ivanovii PAM 55 Genome accession: NC_016011 Putative virulence/resistance : Unknown Product : putative dihydrolipoamide dehydrogenase, E3 subunit of pyruvate dehydrogenase complex Function : - COG functional category : C : Energy production and conversion COG ID : COG1249 EC number : - Position : 1051100 - 1052503 bp Length : 1404 bp Strand : + Note : Highly similar to dihydrolipoamide dehydrogenase,E3 subunit of pyruvate dehydrogenase complex DNA sequence : ATGGTAGTAGGCGATTTTCCAGAAGAAAGAGACACCATAGTCATCGGTGCAGGCCCAGGTGGTTATGTAGCCGCAATTCG AGCAGCACAACTCGGACAAAAAGTGACCATTATTGAAAAAGAATATTACGGCGGTGTTTGTTTAAACGTCGGATGTATTC CTTCAAAAGCACTTATCACTGTTGGTCACCGTTTTAAAGAAGCGAACCACTCTGATAACATGGGAATCACAGCTGATAAC GTAAGCTTAGATTTCACTAAAGCACAAGAATGGAAAGGAAGCGTAGTTAACAAGCTTACATCAGGAGTTAAAGGCCTTCT TAAGAAAAATAAAGTAGAAATGCTAGAAGGAGAAGCGTTCTTCGTGGATGATCATTCTTTACGTGTGATTCACCCTGATT CCGCTCAAACTTATACATTCAATAACGTTATCATTGCAACAGGATCTCGTCCAATCGAAATCCCAGGTTTCAAATATGGT AAACGTGTATTAAGCTCTACTGGTGCACTTGCTCTAACAGAAGTTCCAAAAAAATTAGTCGTTATTGGCGGCGGATATAT CGGAACAGAATTAGGTGGAGCATTCGCTAACCTTGGAACAGAACTTACTATCCTTGAAGGCGGACCAGAAATCTTACCAA CTTACGAAAAAGATATGGTTTCGCTTGTAAAACGTAATCTGAAAAGCAAAAACGTTGAAATGGTTACTAAAGCTCTTGCA AAATCTGCTGAAGAAACAGAAAACGGCGTAAAAGTAACTTATGAAGCAAATGGCGAAACAAAAACTATCGAAGCTGACTA TGTGTTAGTAACAGTAGGTCGTCGTCCAAATACTGACGAAATCGGTTTAGAACAAGCTGGCGTAAAAGTAACTGAACGTG GCTTAGTAGAAGTAGACAAACAAGGTCGCTCTAACATTCCAAACATTTTTGCAATTGGTGATATCGTTCCTGGTGTTCCA CTTGCGCATAAAGCAAGCTACGAAGCAAAAATTGCTGCTGAAGCAATCGCTGGCGAAAAATCTGAAAATGATTATACCGC ACTTCCAGCAGTTGTATTCAGTGATCCAGAACTTGCAACAGTTGGTTTGACTGAAAAAGAAGCAAAAGAAAAAGGCTTTG ATGTAAAAGCTGCTAAATTCCCATTCGGCGGTAACGGTCGTGCACTTTCTTTAGATGCACCTGAAGGATTTGTTCGTTTA GTTACCCGTAAAGAAGATGGCTTAGTTATCGGTGCACAAGTTGCCGGAATGAACGCTTCTGATATTATTTCAGAAATCGG CTTAGCAATCGAATCAGGCATTACTGCAGAAGACATCGCACTTACTATTCACGCTCATCCATCACTTGGAGAGCTAACAA TGGAAGCTGCTGAACTTGCTTTAGGTCGCCCAATTCATATGTAA Protein sequence : MVVGDFPEERDTIVIGAGPGGYVAAIRAAQLGQKVTIIEKEYYGGVCLNVGCIPSKALITVGHRFKEANHSDNMGITADN VSLDFTKAQEWKGSVVNKLTSGVKGLLKKNKVEMLEGEAFFVDDHSLRVIHPDSAQTYTFNNVIIATGSRPIEIPGFKYG KRVLSSTGALALTEVPKKLVVIGGGYIGTELGGAFANLGTELTILEGGPEILPTYEKDMVSLVKRNLKSKNVEMVTKALA KSAEETENGVKVTYEANGETKTIEADYVLVTVGRRPNTDEIGLEQAGVKVTERGLVEVDKQGRSNIPNIFAIGDIVPGVP LAHKASYEAKIAAEAIAGEKSENDYTALPAVVFSDPELATVGLTEKEAKEKGFDVKAAKFPFGGNGRALSLDAPEGFVRL VTRKEDGLVIGAQVAGMNASDIISEIGLAIESGITAEDIALTIHAHPSLGELTMEAAELALGRPIHM |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SE0077 | NP_763632.1 | dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase E3 | Not tested | SCCpbp4 | Protein | 9e-94 | 49 |
