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Name : kdpB (XACM_0753) Accession : YP_004850355.1 Strain : Xanthomonas axonopodis F1 Genome accession: NC_016010 Putative virulence/resistance : Unknown Product : potassium-transporting ATPase subunit B Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2216 EC number : - Position : 863549 - 865597 bp Length : 2049 bp Strand : + Note : COG2216; P Inorganic ion transport and metabolism DNA sequence : ATGTCTACGATCGATACGACTGAAAAACGCGAGCGCGGTGACGCAGCGTTGTTCGATGCCGCCGTGCTGGTTGCGGCGAT GCGTGCGGCGTTCGCCAAGTTGGCGCCGCGGCATCTGCTGCGCAGCCCGGTGATGGCGGTGGTGATGGGCGGTACCTTGC TGGCGGCGGTGATCACCTCCAGCGGGCATTCGCATGCCGGCTTCGGCTGGGCGGTGACGGCGATCCTGTTCGTCACCGTG CTGTTCGGCAATTTTGCCGAAGCCATCGCCGAAGCGCGCGGTCGCGGCCAGGCTGCATCGCTGCGGCGTGCGCGCAAGGA CCTGGTGGCACGCAGGGTGGAAACCGCACTCGGTGGCCGCGAAACGCGTGTGCCGGCAGCGGAGTTGCGTCCGGGCGATT ACGTGATGGTATCCGAAGGCGAGTTCGTGCCGGCCGATGGCGAGATCGTGCGCGGTGTGGCCACCATCAACGAAGCGGCG GTGACCGGCGAATCGGCACCGGTACTGCGCGAGGCCGGTACCGATCGCAGCGGCGTGATCGGCGGCACGCGCGTGCTCTC CGACGAGATCGTGTTCAAGGTCACTGCCGAACCGGGACACAGCTTCCTCGATCGCATGATTGCGTTGGTGGAAGGTGCCA ACCGGCAAAAGACACCGAACGAAATCGCGCTGACCTTGTTGCTGGCCGCGATGACGCTGACGTTCTTGATCGTGGTGGCA TCGTTGCCGGCGATCGCGGGCTTTGTTGGCGTCACGCTGGATCCGCTGCTGCTGATCGCATTGCTGGTGTGCCTGATCCC GACCACCATCGGCGGGCTGTTGCCGGCGATCGGTATCGCCGGCATGAACCGCGCGCTGTCGGCCAATGTGCTGGCCAAAT CGGGCAAGGCCGTGGAAGTGGCCGGCGACGTGGATGTGCTGCTGCTCGACAAGACCGGCACCATCACCTACGGCGACCGC CAGGCCACCACATTCCATCCGCTGGCCGGCGTCGACCGTGCACAACTGCGCGATGCGGCCATGCTCGCCTCGCTGGCCGA CCCCACACCGGAAGGCAAGTCCATCGTCAAGCTGGCGCGTCAGCAAGGTGCGGTAGCAGTGGAAGCCGAGGGTGGGCATT TCATCGCGTTCACCGCGCAGACGCGCATGTCCGGCGTGGATATCGGTGGGCGCAGCATCCGCAAGGGCGCCGGCGATGCG ATCGTGGCGTATGTGCAGGCGCAGGGCGCGACGGTCTCGCCGGAATTGCAGGGCCGCATCGAGGACGTCGCACGTGGCGG TGCCACGCCGTTGGTGGTGGCCGAAGGCCGTCATGTGCTCGGTGTGGTCGAGTTGAGCGACGTGGTCAAGCAGGGCATCA AGGAAAAATTCGCGCAGTTGCGTGCGATGGGCATCAAGACCGTGATGATCACCGGCGACAACCCGCTCACCGCGGCGGCG ATCGCTGCCGAAGCCGGCGTGGACGACTACATCGCCCAGGCCCGCCCGGAAGACAAGCTGGCACGCATCCGTGCCGAACA GACGGGCGGACGGCTGGTGGCGATGGTCGGCGACGGCACCAACGACGCCCCGGCGCTCGCGCAGGCCGATGTGGGCCTGG CAATGAACTCCGGCACCCAGGCGGCCAAGGAAGCCGGCAACATGGTGGATCTGGATTCGGATCCGGCCAAGTTGCTGGCG GTGGTGGAAGTGGGCAAGCAGCAGCTGATCACGCGTGGCGCGTTGACCACCTTCTCGCTGGCCAACGACGTTTCCAAGTA CTTCGCGATCCTGCCGGCGCTGTTTGCAGCCGCCATCCCGTCGATGGCAGCGCTCAACGTGATGCAGCTCTCCAGCCCGC GTCATGCGGTGCTGGCGGCCTTGATCTTCAATGCGTTGATCATTCCGGCATTGATTCCGCTGGCGTTGCGCGGGGTGCGT TTTCGTCCTTCCAGCGCCACCGCGCTGCTGCGCCGGAACATGCTGATTTACGGCGTGGGCGGCGTGTTGCTGCCGTTCGC GGCGATCAAAGTGATCGATCTGGCGCTGGTTGCCGTCCTCGGTGCCTGA Protein sequence : MSTIDTTEKRERGDAALFDAAVLVAAMRAAFAKLAPRHLLRSPVMAVVMGGTLLAAVITSSGHSHAGFGWAVTAILFVTV LFGNFAEAIAEARGRGQAASLRRARKDLVARRVETALGGRETRVPAAELRPGDYVMVSEGEFVPADGEIVRGVATINEAA VTGESAPVLREAGTDRSGVIGGTRVLSDEIVFKVTAEPGHSFLDRMIALVEGANRQKTPNEIALTLLLAAMTLTFLIVVA SLPAIAGFVGVTLDPLLLIALLVCLIPTTIGGLLPAIGIAGMNRALSANVLAKSGKAVEVAGDVDVLLLDKTGTITYGDR QATTFHPLAGVDRAQLRDAAMLASLADPTPEGKSIVKLARQQGAVAVEAEGGHFIAFTAQTRMSGVDIGGRSIRKGAGDA IVAYVQAQGATVSPELQGRIEDVARGGATPLVVAEGRHVLGVVELSDVVKQGIKEKFAQLRAMGIKTVMITGDNPLTAAA IAAEAGVDDYIAQARPEDKLARIRAEQTGGRLVAMVGDGTNDAPALAQADVGLAMNSGTQAAKEAGNMVDLDSDPAKLLA VVEVGKQQLITRGALTTFSLANDVSKYFAILPALFAAAIPSMAALNVMQLSSPRHAVLAALIFNALIIPALIPLALRGVR FRPSSATALLRRNMLIYGVGGVLLPFAAIKVIDLALVAVLGA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kdpB(SCCmec) | NP_370597.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 2e-125 | 54 |
| kdpB | NP_373310.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 2e-125 | 54 |
| kdpB | YP_190029.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 2e-125 | 54 |
| kdpB | BAA82181.1 | potassium-transporting ATPase(B chanin) | Not tested | Type-II SCCmec | Protein | 1e-125 | 54 |
| SAR0071 | YP_039539.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 2e-125 | 54 |
| kdpB | YP_251949.1 | potassium-transporting ATPase subunit B | Not tested | SCCmec | Protein | 2e-125 | 54 |
| kdpB | NP_814334.1 | potassium-transporting ATPase subunit B | Not tested | Not named | Protein | 1e-126 | 54 |
| ef0088 | AAM75291.1 | EF0088 | Not tested | Not named | Protein | 9e-127 | 54 |
