Gene Information

Name : nagA (XACM_0715)
Accession : YP_004850318.1
Strain : Xanthomonas axonopodis F1
Genome accession: NC_016010
Putative virulence/resistance : Virulence
Product : N-acetylglucosamine-6-phosphate deacetylase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1820
EC number : -
Position : 819745 - 820899 bp
Length : 1155 bp
Strand : +
Note : COG1820; G Carbohydrate transport and metabolism

DNA sequence : 
ATGCACGCTCTCGCGACTCAGGCACTGTGTAATGCACGCGTGCTCACCGACAACGGATTGCAGGACGGCCTGGTCGTGGT
ACTGGCTGGCACGCAGATCCAGGCGATCGTGCCGGCCGACGATGCGCGCGTTGCGCAGGCGCATACGCGCGTGGATCTGG
GCGGCGCCACCTTGTTGCCGGGCTTTATCGACATCCAGGTCAACGGCGGTGGCGGCGTGTTGTTCAACAACGCACGCGAC
CCGCAGGCGCTGGCCACCATTGCGGCCGCACATCGCCGCTTCGGTACCACCGGCATGCTGCCGACCTTGATCAGCGATAC
CGCGCAGGTGATGGCCGAAGCGATCGATGCCACGCGCCAGGCCATCGCACAAGGCGTGCCCGGAGTGCTCGGCATCCATC
TGGAGGGCCCGTACCTGAGTCCTGCGCGCAAGGGCACGCACGACGCAGGCAAATTCCGCGTGCCGGACGCGCACGAGATT
GCCGTCGATACCTCATTGGACAACGGCGTCACCCTGATCACGCTCGCACCCGAACGCGTGCCGCTGGACGATATCCGTGC
CTTCGTTGCCGGTGGCGCGATCGTGTTCGCCGGCCACACTGCGGCCACCTACGAGCAGGCGTGCGAGGGCATTGCCGCCG
GCGTCAGCGGCTTCACGCACGTGTACAACGCGATGTCCCAGCTGGCTGGCCGCGAACCCAATGCAGTCGGCGCAGCGCTG
GAAGACCCTAACGTGTGGTGCGGCGTCATCGTCGACGGCGTGCACGTGCATCCGGCCAGCCTGCGCGTGGCGCTGGCGGC
CAAGCCACGCGGTAAATTGCTGCTGGTCACCGACGCCATGCCGATGGTCGGCAGCGACAGCGCCAGCTTCGACCTCTACG
GCGAAACCATCACCGCCGCGGACGGCGTGGTGCGCAATGCCGATGGTGCATTGGCCGGCTCTGCATTGGACATGGCCACC
GCCGTGCGCAACAGCGTGCGCTGGCTGGGCGTAGACCTGGCCGAAGCTGCGCGCATGGCCTCCACCTATCCCGCGCAATG
CATTGGCCTTGGCGAACGCCTGGGACGCATCGCACCTGGCTACCAAGCCGACCTGGTACTGGTGGATGACGATGTGCAGG
TGTTGAGCACGTGGGTGGCTGGGCAGCGCGATTAG

Protein sequence : 
MHALATQALCNARVLTDNGLQDGLVVVLAGTQIQAIVPADDARVAQAHTRVDLGGATLLPGFIDIQVNGGGGVLFNNARD
PQALATIAAAHRRFGTTGMLPTLISDTAQVMAEAIDATRQAIAQGVPGVLGIHLEGPYLSPARKGTHDAGKFRVPDAHEI
AVDTSLDNGVTLITLAPERVPLDDIRAFVAGGAIVFAGHTAATYEQACEGIAAGVSGFTHVYNAMSQLAGREPNAVGAAL
EDPNVWCGVIVDGVHVHPASLRVALAAKPRGKLLLVTDAMPMVGSDSASFDLYGETITAADGVVRNADGALAGSALDMAT
AVRNSVRWLGVDLAEAARMASTYPAQCIGLGERLGRIAPGYQADLVLVDDDVQVLSTWVAGQRD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1783 NP_231418.1 N-acetylglucosamine-6-phosphate deacetylase Not tested VPI-2 Protein 4e-59 41
nagA-2 YP_001217323.1 N-acetylglucosamine-6-phosphate deacetylase Not tested VPI-2 Protein 4e-59 41
nagA ACA01848.1 N-acetylglucosamine-6-phosphate deacetylase Not tested VPI-2 Protein 4e-59 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
nagA YP_004850318.1 N-acetylglucosamine-6-phosphate deacetylase VFG1116 Protein 2e-59 41