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Name : xcsE (XACM_0701) Accession : YP_004850304.1 Strain : Xanthomonas axonopodis F1 Genome accession: NC_016010 Putative virulence/resistance : Virulence Product : type II secretion system protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 807241 - 808728 bp Length : 1488 bp Strand : + Note : COG2804; N Cell motility; U Intracellular trafficking, secretion, and vesicular transport DNA sequence : ATGAGCAGCGCCCGCGCCAGCATTTCCTATGCATTCGCCAAGCGTCACGGCGTAGTGCTGCTTGGCAGCGACACCACCGC GCAGATCGGTTTGCGCGAAGGTGGCGATGTGCAGGCCCTGATCGAGTTGCGCCGCGCGTTGGGCATGCCACTGCAGGTGC GCACGCTGGCGCCGCCAGTGTTCGACCGGCAGGTATCGGAGATCTACGCCGATGCCGGGCTGGAGCAAGGTGTGCAGGTG GAAGCGCTGGATCTGCATGGCAGCCTGGATTCGTTGATCGACGACATTCCCACCGCCGATCTGCTCGACAGCCAGGACGA TGCGCCGATCATTCGTTTGATCAACGGCATCATCGCCGAGGCCGCGCGGCTGGGTGCATCCGACGTGCATCTGGAATCCT ACGAGTCGCGCCTGCGCGTGCGCCTGCGCGTGGATGGCGTGATGCGCGAGGCAGCCACGCTGCCCGGACGCATCGCACCG CTGCTGGTGTCGCGCGTCAAGGTGATGGCGCGGCTGGATATCGCCGAAAAACGCATCCCACAGGATGGACGCGTGTCGCT GGTGATGGGGGCCAAGGCACTGGACGTGCGTGTGTCCACGTTGCCCACGCGCGGCAGCGAGCGGGTGGTGTTGCGTATCC TGGATAAGGAGCAGGGCACGCTGTCGCTGGCGCAGCTGGGCATGCCACCTGTGGTGATGCACACCGTGCAGCGCGCATTG CAGGTGCCCAATGGCATCGTGCTGGTCACCGGGCCCACCGGTTCGGGCAAGACCACGACCTTGTACGCGGCGCTGCGCCT GCTCAACGATGGCTCGCGCAATATCCTCACCGTGGAAGATCCGGTGGAATACGCCATCGATGGCGTCGGCCAGACCCAGG TCAACGCACGTGTCGGCATGACCTTCGCCGCCGGCCTGCGCGCGATCCTGCGCCAGGACCCGGACGTGGTGATGATCGGC GAGATCCGCGATACCGAGACCGCGCAGATTGCGGTACAGGCCAGCCTCACCGGCCATCTGGTGCTCTCCACCGTGCACAC CAACGATGCGGTGGGCGCGGTCACGCGGTTGCGCGATATGGGGATCGAGCCGTTCTTGCTGGCTTCCAGTCTGCGACTGA TCCTGGCGCAGCGGCTGGTGCGGCGCTTGTGCCCGCAATGCCGTAGCGAGCGTTCGATCGATACCGGCACGCGTCAACTG CTGGATGCGCCGGCCGATGCAGTGATCTACACCGCCATGGGCTGCAACGCTTGCCACCACAGCGGCTACGCCGGCCGCGT AGGCATCTACGAGGCGATTGCGGTAGACGATGCGATGCGCCGTTTGATCGGCGACAACGCCGACGAAGACGCGCTGGCTG CTGTGGCCTTCGCACGCGCGCCGCGGCTGGGCGATGCCGCACGCGCTGCCGTGCTGCAAGGCCTGACTACGCTGGAAGAA GCGCTGCGTGTGACCCGCCAACAGGACGACGCGCATGCCGCAATTTGA Protein sequence : MSSARASISYAFAKRHGVVLLGSDTTAQIGLREGGDVQALIELRRALGMPLQVRTLAPPVFDRQVSEIYADAGLEQGVQV EALDLHGSLDSLIDDIPTADLLDSQDDAPIIRLINGIIAEAARLGASDVHLESYESRLRVRLRVDGVMREAATLPGRIAP LLVSRVKVMARLDIAEKRIPQDGRVSLVMGAKALDVRVSTLPTRGSERVVLRILDKEQGTLSLAQLGMPPVVMHTVQRAL QVPNGIVLVTGPTGSGKTTTLYAALRLLNDGSRNILTVEDPVEYAIDGVGQTQVNARVGMTFAAGLRAILRQDPDVVMIG EIRDTETAQIAVQASLTGHLVLSTVHTNDAVGAVTRLRDMGIEPFLLASSLRLILAQRLVRRLCPQCRSERSIDTGTRQL LDAPADAVIYTAMGCNACHHSGYAGRVGIYEAIAVDDAMRRLIGDNADEDALAAVAFARAPRLGDAARAAVLQGLTTLEE ALRVTRQQDDAHAAI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 2e-112 | 51 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-112 | 51 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| xcsE | YP_004850304.1 | type II secretion system protein E | VFG0182 | Protein | 3e-118 | 55 |
| xcsE | YP_004850304.1 | type II secretion system protein E | VFG1876 | Protein | 1e-113 | 51 |
| xcsE | YP_004850304.1 | type II secretion system protein E | VFG2048 | Protein | 5e-113 | 51 |
| xcsE | YP_004850304.1 | type II secretion system protein E | VFG2426 | Protein | 1e-76 | 48 |
| xcsE | YP_004850304.1 | type II secretion system protein E | VFG0112 | Protein | 4e-80 | 44 |
