Gene Information

Name : hpa1 (XACM_0406)
Accession : YP_004850013.1
Strain : Xanthomonas axonopodis F1
Genome accession: NC_016010
Putative virulence/resistance : Virulence
Product : Hpa1 protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 455792 - 456190 bp
Length : 399 bp
Strand : -
Note : -

DNA sequence :
ATGATGAATTCTTTGAACACACAGATCGGCGCCAACTCGTCCTTCTTGCAGGTCGATCCCAGCCAGAACTCGCAACCCGG
TTCGAACCAGGGCAACCAAGGCATCTCGGAAAAGCAGCTGGACCAGCTGCTGACCCAGCTCATCATGGCCCTGCTTCAGC
AGAGCAACAATGCCGACCAGGGTCAGGGCCAGGGTGGTGACTCTGGTGGTCAAGGCGGCAATTCGCAGCAGGCCGGGCAG
CCCAATGGTTCCCCCTCGCCATACACCCAGATGCTCATGAATATCGTCGGAGACATTCTCCAGTCGCAGAATGGCGGTGG
CTTCGGCGGCGGGTTCGGCGGTGGCTTTGGTGGCGGCCTCGGCACCAGCCTGGCCAGCGACACCGGATCGATGCAGTAA

Protein sequence :
MMNSLNTQIGANSSFLQVDPSQNSQPGSNQGNQGISEKQLDQLLTQLIMALLQQSNNADQGQGQGGDSGGQGGNSQQAGQ
PNGSPSPYTQMLMNIVGDILQSQNGGGFGGGFGGGFGGGLGTSLASDTGSMQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hpa1 NP_640771.1 Hpa1 protein Virulence Hrp PAI Protein 1e-12 90
hpaG AAP34334.1 HpaG Virulence Hrp PAI Protein 5e-13 87
hpa1 YP_198734.1 protein Hpa1 Virulence Hrp PAI Protein 8e-09 63
ORF1 BAB07848.1 Hpa1 homolog Not tested Hrp PAI Protein 5e-09 63
hpa1 AAC95121.2 Hpa1 Not tested Hrp PAI Protein 5e-09 63
xopA AAL78294.1 XopA Virulence Hrp PAI Protein 2e-06 49
xopA YP_362171.1 outer protein A Virulence Hrp PAI Protein 4e-06 49