Gene Information

Name : hrcT (XACM_0404)
Accession : YP_004850011.1
Strain : Xanthomonas axonopodis F1
Genome accession: NC_016010
Putative virulence/resistance : Virulence
Product : HrcT protein
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG4791
EC number : -
Position : 452320 - 453150 bp
Length : 831 bp
Strand : +
Note : COG4791; U Intracellular trafficking, secretion, and vesicular transport

DNA sequence :
ATGAACGACGCCACCGATGCCTTGCTGGCCATTTCCTCGCAGGGCGTGTCGCTGTTGACCCTGCTGGCACTGTGCGGGGT
GCGCGTGTTCGTGATGTTCATCGTGCTACCGGCAACAGCGCAGGACAGTCTTCCTGGAATCGCGCGCAATGGCGTCATCT
ACGTCCTGAGCTCGTTCATCGCCTATGGGCAGCCGGCCGATGCGCTGGCGAAGATCCAGGCGGCGGGCCTGGTCGGGGTG
GCGTTGAAGGAGGCGTTCGTCGGTTTGCTTATCGGGTTTGCCGCATCGACGGTGTTCTGGATCGCCGAGAGCGTTGGCCT
GCTGATCGACGACCTTGCCGGTTACAACAACGTGCAGATGACCAACCCGCTCAGCGGCCAGCAAAGCACGCCGGTGTCCA
CAGTGCTGCTGCAACTGGCCATCGTGTCGTTCTACGCATTGGGCGGCATGCTGATGTTGCTCGGCGCGCTGTTCGAATCG
TTTCGCTGGTGGCCGCTGACCCAGCTTGGGCCGAACATGGGGGCGGTTGCCGAATCGTTCGTGATCCAGCAATCCGACAG
CATGATGGCGGCCGTCGTCAAACTGTCCGCACCGGTGATGCTGGTGCTTGTGCTGGTGGATCTTGCGATCGGCCTGGTGG
CGCGAGCGGCCGACAAACTCGAACCGTCGAACTTGAGTCAGCCAATCCGTGGGGTGCTGGCGTTGTTGCTGCTCGCCTTG
CTGACCAGCGTCTTCATCGCGCAATTCGGCGAAGCACTCGGTTTCCTGCATTTTCAGCAGCAATTGCACGATGCCGCCAA
CCTGGCTGGCAAGGGAGGCGCGAGGCACTGA

Protein sequence :
MNDATDALLAISSQGVSLLTLLALCGVRVFVMFIVLPATAQDSLPGIARNGVIYVLSSFIAYGQPADALAKIQAAGLVGV
ALKEAFVGLLIGFAASTVFWIAESVGLLIDDLAGYNNVQMTNPLSGQQSTPVSTVLLQLAIVSFYALGGMLMLLGALFES
FRWWPLTQLGPNMGAVAESFVIQQSDSMMAAVVKLSAPVMLVLVLVDLAIGLVARAADKLEPSNLSQPIRGVLALLLLAL
LTSVFIAQFGEALGFLHFQQQLHDAANLAGKGGARH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcT YP_362165.1 HrcT protein Virulence Hrp PAI Protein 9e-103 98
hrpB8 AAB08463.1 HrpB8 Virulence Hrp PAI Protein 7e-103 98
hrcT NP_640769.1 HrcT protein Virulence Hrp PAI Protein 6e-101 97
hrcT AAP34337.1 HrcT Virulence Hrp PAI Protein 4e-101 97
hrpB8 YP_198732.1 protein HrpB8 Virulence Hrp PAI Protein 3e-100 96
hrpB8 BAB07850.1 HrpB8 Virulence Hrp PAI Protein 2e-100 96
hrpB8 AAF61279.1 HrpB8 Virulence Hrp PAI Protein 2e-100 96
hrcT NP_636612.1 HrpB8 protein Virulence Hrp PAI Protein 1e-93 87
XC_3004 YP_244072.1 HrpB8 protein Virulence Hrp PAI Protein 1e-93 87