|
Name : hrcL (XACM_0401) Accession : YP_004850008.1 Strain : Xanthomonas axonopodis F1 Genome accession: NC_016010 Putative virulence/resistance : Virulence Product : type III secretion system protein HrpB Function : - COG functional category : N : Cell motility COG ID : COG1317 EC number : - Position : 449802 - 450503 bp Length : 702 bp Strand : + Note : COG1317; N Cell motility; U Intracellular trafficking, secretion, and vesicular transport DNA sequence : ATGCGTCTGTGGTTGAGGTCAACGCCCGATGCGATCGGTCTGGATTGCGATGTCATTCCGCGCGAGGCGCTGGCCTCGGT GTTGGCGCTGGACGCTGCCACTGCCGAGGTGCACGCACGCTGCGAACAGGCCCTGAGCCAGGCGCAGACACGTGCACAGA CGCTGGTCGACGAGGCCCAGCAGCAGGCCGAGGCGATCCTGCACGATGCGCGCCAGAAGGCCGAGCGCAGCGCACGCCTG GGATATGCAGCGGGCCTGCGACGTCAGCTCGATGAGTGGAACGAATCGGGCCTGCGCCATGCCTTTGCCGCCGAAGCGGC CGTGCAGCGGTCACGCGAGCGTCTGGCCGAGATTGTGGCGCGCACCTGCGAGCACATCATCCTCGGACACGATCCTGCGG CGCTGTACGCGCGTGCGGCGCAGGCCTTGGAAGGTGCCCTGGACGAGGCCAAAGCCCTGCGGGTGAGCGTGCACCCCGAC GCGGTGGACGCTGCGCGGCGCGCCTTCGATGCGGCCGCCACCGAGGCGGGCTGGACCCTGCAGGTCGAGCTATGCGGCGA TGCCGACCTGGCCGTGGGCGCCTGCGTGTGCGAATGGGATACGGGCGTGTTCGAGACCGATCTGCGCGATCAGCTGCGCA GTCTGCGGCGCGTCATTCGCCGCGTGTTGGCCGCACCCCAGGAGCCGGCGGATGCTGGCTGA Protein sequence : MRLWLRSTPDAIGLDCDVIPREALASVLALDAATAEVHARCEQALSQAQTRAQTLVDEAQQQAEAILHDARQKAERSARL GYAAGLRRQLDEWNESGLRHAFAAEAAVQRSRERLAEIVARTCEHIILGHDPAALYARAAQALEGALDEAKALRVSVHPD AVDAARRAFDAAATEAGWTLQVELCGDADLAVGACVCEWDTGVFETDLRDQLRSLRRVIRRVLAAPQEPADAG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcL | YP_362162.1 | type III secretion system protein HrpB | Virulence | Hrp PAI | Protein | 2e-70 | 99 |
| hrpB5 | AAB08460.1 | HrpB5 | Virulence | Hrp PAI | Protein | 1e-70 | 99 |
| hrpB5 | AAP34340.1 | HrpB5 | Virulence | Hrp PAI | Protein | 7e-75 | 97 |
| hrpB5 | NP_640766.1 | type III secretion system protein HrpB | Virulence | Hrp PAI | Protein | 1e-74 | 97 |
| hrpB5 | AAF61282.1 | HrpB5 | Virulence | Hrp PAI | Protein | 2e-72 | 94 |
| hrpB5 | YP_198729.1 | type III secretion system protein HrpB | Virulence | Hrp PAI | Protein | 3e-72 | 94 |
| hrpB5 | BAB07853.1 | HrpB5 | Virulence | Hrp PAI | Protein | 2e-72 | 94 |
| XC_3007 | YP_244075.1 | type III secretion system protein HrpB | Virulence | Hrp PAI | Protein | 5e-53 | 78 |
| hrpB5 | NP_636609.1 | type III secretion system protein HrpB | Virulence | Hrp PAI | Protein | 4e-53 | 78 |
