Gene Information

Name : hrpB4 (XACM_0400)
Accession : YP_004850007.1
Strain : Xanthomonas axonopodis F1
Genome accession: NC_016010
Putative virulence/resistance : Virulence
Product : HrpB4 protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 449188 - 449817 bp
Length : 630 bp
Strand : +
Note : -

DNA sequence :
ATGGACGACACGCGGATCGACAATGCGGCACGCTGTGTTCAGCGCTGGACGGACGCGTTGGCGCAACTGGCAGAATCCTT
GGACGCCGCACGGGTGGCGCATTGGCTTGGCCCGGTGGCAGCGTCGGGCTGGGCAGCGGCGCCCGTCTACCGTCGTATGC
GGGTAATCCAGGCGTGGTCTGGATGGTCGGAATTGTCGCCGTCTGCACTCGGCCTGCATGCGAACCAACTTGCCCTGCTG
ATGCCCGCGCGATTGGCCAAGGTCCTGATCGCGCGGGCGTTGTTCTCGCGCGGGTTGGCGGTGCGTCGTTGTATCGAGCG
CGAACGTCTGGACTGGCTCGAACAGTGTGTGGGGCCGGCCGTGCTTGAGCATGTGCGCCAGAACGCGTCGGCCGGCCTCC
CCGTGCCCCTGTTGCCACGCGATGCCGATCAGGCGGCGTGGGTCGGCGACGGTTGGCGTCGGATGCAGGCCGATGGCGTC
TGGTCCAACCCGGTTGTTGCCAAGCTGCTGGCGCTGTCCTTGCCGTTGGGCGCCGCGCAGGTGGCCACCGTCGCAGCAGA
CGGTGCGAGCGATGCCTTCCTGACCGCGCTTCCCACCCTGATACCGGAGGCGTCATGCGTCTGTGGTTGA

Protein sequence :
MDDTRIDNAARCVQRWTDALAQLAESLDAARVAHWLGPVAASGWAAAPVYRRMRVIQAWSGWSELSPSALGLHANQLALL
MPARLAKVLIARALFSRGLAVRRCIERERLDWLEQCVGPAVLEHVRQNASAGLPVPLLPRDADQAAWVGDGWRRMQADGV
WSNPVVAKLLALSLPLGAAQVATVAADGASDAFLTALPTLIPEASCVCG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrpB4 AAB08459.1 HrpB4 Virulence Hrp PAI Protein 8e-83 99
hrpB4 YP_362161.1 HrpB4 protein Virulence Hrp PAI Protein 1e-82 99
hrpB4 YP_198728.1 protein HrpB4 Virulence Hrp PAI Protein 7e-81 97
hrpB4 BAB07854.1 HrpB4 Virulence Hrp PAI Protein 5e-81 97
hrpB4 AAF61283.1 HrpB4 Virulence Hrp PAI Protein 3e-77 96
hrpB4 NP_640765.1 HrpB4 protein Virulence Hrp PAI Protein 5e-79 95
hrpB4 AAP34341.1 HrpB4 Virulence Hrp PAI Protein 3e-79 95
XC_3008 YP_244076.1 HrpB4 protein Virulence Hrp PAI Protein 1e-56 69
hrpB4 NP_636608.1 HrpB4 protein Virulence Hrp PAI Protein 1e-56 69