Gene Information

Name : hrcJ (XACM_0399)
Accession : YP_004850006.1
Strain : Xanthomonas axonopodis F1
Genome accession: NC_016010
Putative virulence/resistance : Virulence
Product : HrcJ protein
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG4669
EC number : -
Position : 448419 - 449180 bp
Length : 762 bp
Strand : +
Note : COG4669; U Intracellular trafficking, secretion, and vesicular transport

DNA sequence :
ATGCGCGCGCCGAGATGCCTGGTGGTGCTGCTGGTGGCGCTGCTGCTGTCTGCGTGCAGTCAGCAGCTGTACTCCGGGCT
CACCGAAAATGATGCCAACGACATGCTCGAGGTGCTGCTGCATGCGGGCGTGGATGCGTCCAAGGTCACGCCAGACGACG
GCAAGACCTGGGCGGTGAACGCACCGCACGATCAGGTGTCCTATTCGCTGGAGGTGCTACGCGCGCATGGGTTGCCGCAT
GAGCGGCACGCCAATCTCGGCGAGATGTTCAAGAAGGACGGGCTGATCTCGACACCCACCGAAGAGCGCGTACGTTTCAT
CTATGGCGTGTCGCAGCAGCTATCGCAGACCTTGTCGAATATCGATGGGGTGATCTCGGCCGATGTGGAAATCGTGCTGC
CCAACAACGACCCGCTGTCCACCTCGGTAAAGCCGTCCAGCGCTGCGGTGTTCATCAAGTTCCGCGTCGGTAGCGATCTG
ACCAGCCTGGTGCCCAACATCAAGACGTTGGTCATGCACAGCGTGGAGGGACTCACCTACGAAAACGTCAGCGTCACGCT
GGTGCCGGGCGGAGCGGAGAGCGATGCGCAGTTCACCGCGTCGGCACCGCCGAGACCTTCGCCATGGCCGTGGCTGGTTG
GGTGTGTGTTGGCGTTGTGCCTGGCGGGTGCGGCGGCGCTGTATTGGTGGCCAAACCCGCAGGCGGGCCGGTGGGGCGGC
TGGCAGCGCCTGCGCGAGTTGACGAAAGGCAAAGCCGGGTGA

Protein sequence :
MRAPRCLVVLLVALLLSACSQQLYSGLTENDANDMLEVLLHAGVDASKVTPDDGKTWAVNAPHDQVSYSLEVLRAHGLPH
ERHANLGEMFKKDGLISTPTEERVRFIYGVSQQLSQTLSNIDGVISADVEIVLPNNDPLSTSVKPSSAAVFIKFRVGSDL
TSLVPNIKTLVMHSVEGLTYENVSVTLVPGGAESDAQFTASAPPRPSPWPWLVGCVLALCLAGAAALYWWPNPQAGRWGG
WQRLRELTKGKAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrpB3 AAB08458.1 HrpB3 Virulence Hrp PAI Protein 1e-86 99
hrcJ YP_362160.1 HrcJ protein Virulence Hrp PAI Protein 1e-86 99
hrcJ AAP34342.1 HrcJ Virulence Hrp PAI Protein 2e-86 99
hrcJ NP_640764.1 HrcJ protein Virulence Hrp PAI Protein 7e-86 98
hrpB3 AAF61284.1 HrpB3 Virulence Hrp PAI Protein 4e-82 97
hrpB3 YP_198727.1 protein HrpB3 Virulence Hrp PAI Protein 6e-82 97
hrpB3 BAB07855.1 HrpB3 Virulence Hrp PAI Protein 4e-82 97
XC_3009 YP_244077.1 HrcJ protein Virulence Hrp PAI Protein 4e-78 82
hrcJ NP_636607.1 HrcJ protein Virulence Hrp PAI Protein 4e-78 82