Gene Information

Name : hrpB1 (XACM_0397)
Accession : YP_004850004.1
Strain : Xanthomonas axonopodis F1
Genome accession: NC_016010
Putative virulence/resistance : Virulence
Product : HrpB1 protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 447536 - 447991 bp
Length : 456 bp
Strand : +
Note : -

DNA sequence :
GTGGAGAAGATTCAATGTCCCGGGTCGGTCGTGAGTGGGCTCATCGAACTGATCACGGTCGGACTCACCCATGAAAAGAT
TCAGGACGCTGCCGCTGTGCTGGCCGCAGTCCGCGTCCTGCGGCCGGAGCTGAAAGCGCTGGACACCTTCGATGCATGGA
TTTCGATCAAGCGCGGCAATTACGTGGAAGGTGCGCGCCTGTTGCGCGAACTGGAGAGCGACGCCGGCTCCAAGCCGCTG
TGCAGGGCCTTGTACGCCTGCTGCCTGTTCGCGATGGGGGACCCGTCGTGGCATGGCGTTGCAGACGGGCTGATCGAAGA
AGACGCCGATGCCGATGCGGTGGCCCTGGTCAAGGCGCTGTCCGGGCGAAGCACCCCAACGTCCGCGCCGGCGGAAGTAC
CGGTCGAATCTTCAGCACCGATGGAAGTTCCGAATTCGCAGTACCTGCGCGCCTGA

Protein sequence :
MEKIQCPGSVVSGLIELITVGLTHEKIQDAAAVLAAVRVLRPELKALDTFDAWISIKRGNYVEGARLLRELESDAGSKPL
CRALYACCLFAMGDPSWHGVADGLIEEDADADAVALVKALSGRSTPTSAPAEVPVESSAPMEVPNSQYLRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrpB1 YP_362158.1 HrpB1 protein Virulence Hrp PAI Protein 6e-52 99
hrpB1 AAB08456.1 HrpB1 Virulence Hrp PAI Protein 4e-52 99
hrpB1 YP_198725.1 protein HrpB1 Virulence Hrp PAI Protein 4e-52 98
hrpB1 BAB07857.1 HrpB1 Virulence Hrp PAI Protein 3e-52 98
hrpB1 AAF61286.1 HrpB1 Virulence Hrp PAI Protein 3e-52 98
hrpB1 NP_640762.1 HrpB1 protein Virulence Hrp PAI Protein 3e-51 97
hrpB1 AAP34344.1 HrpB1 Virulence Hrp PAI Protein 2e-51 97
hrpB1 NP_636605.1 HrpB1 protein Virulence Hrp PAI Protein 3e-43 85
XC_3011 YP_244079.1 HrpB1 protein Virulence Hrp PAI Protein 3e-43 85