|
Name : hrcU (XACM_0396) Accession : YP_004850003.1 Strain : Xanthomonas axonopodis F1 Genome accession: NC_016010 Putative virulence/resistance : Virulence Product : type III secretion system protein HrcU Function : - COG functional category : N : Cell motility COG ID : COG1377 EC number : - Position : 446248 - 447321 bp Length : 1074 bp Strand : - Note : COG1377; N Cell motility; U Intracellular trafficking, secretion, and vesicular transport DNA sequence : ATGTCGGAAGAAAAAACCGAGAAGCCGACCGAGAAGAAACTGCGGGATGCGCGCAAGGACGGGGAAGTTCCGGTCAGCCC GGACGTCACGGCAGCGGCGGTGCTCTTCGGCGCGTTATTGGTGATGAAATCGGCCGGCGTTTACTTCTCCGATCACATGC GTGCATTGATGACGATCGGCTTCGATTTTTCCGAACATACACGCGATGCAGCGGCCATCAACCGCGCACTCGGCCATATC GGCATCCAGGGATTGCTGTTGATGCTGCCGTTCCTGGCTGCCTGCCTGGTGGCCGGTATGGCGGGCGGTGCGTTCCAGAC TGGCCTGAATGCCTCGCTCAAGCCGGTGGCGCCCAAGTTCGATTCCCTCAATCCCGCAACCGGGGTCAAGAAACTCTTTT CGTTGCGAAGCCTCATCAACTTGCTGAAGTTGATCATCAAGGCCATCTTGATCGGCGTGGTGCTGTGGGTCGGTATCCGC GCGCTCATGCCGATGATCATTGGGCTTGCCTACGAGACACCGCTTGATGTTGCGCAAATTGCCTGGCGCACCCTGGGCAT GCTCTTCGCACTGGGCGTGCTGCTGTTCGTCCTGGTCGGCGCTGCAGACTGGAGCGTGCAGCGCTGGCTGTTCATCCGCG ACAAGCGAATGAGCAAGGACGAGCAGAAGCGCGAATTCAAGGAAAGCGAGGGCGACCCCGAAATCAAGGGCAAGCGCAAG GAATTCGCCAAGGAGCTGGTCTTCGGCGACCCGCGCGAGCGCGTGGCCAAGGCCAAGGTGATGGTGGTCAACCCGACCCA TTACGCAGTGGCGCTGGCCTACGAGCCCGACGACTTCGGCTTGCCGCAGGTCGTTGCCAAGGGCGAGGACGACGGCGCAC TGGAACTGCGCGCTTTCGCGCATAACCAGGGCATTCCGATCGTTGCCAATCCGCCACTGGCGCGTGCGCTGTATCAGGTT GAATTGGGCGATGCAATCCCCGAGCCACTGTTCGAAACGGTTGCGGTGGTGTTGCGCTGGGTCGATGAACTCGGTCGCGA CCACGGCGACGGCGATGGAGCCCTGCCATGCTAG Protein sequence : MSEEKTEKPTEKKLRDARKDGEVPVSPDVTAAAVLFGALLVMKSAGVYFSDHMRALMTIGFDFSEHTRDAAAINRALGHI GIQGLLLMLPFLAACLVAGMAGGAFQTGLNASLKPVAPKFDSLNPATGVKKLFSLRSLINLLKLIIKAILIGVVLWVGIR ALMPMIIGLAYETPLDVAQIAWRTLGMLFALGVLLFVLVGAADWSVQRWLFIRDKRMSKDEQKREFKESEGDPEIKGKRK EFAKELVFGDPRERVAKAKVMVVNPTHYAVALAYEPDDFGLPQVVAKGEDDGALELRAFAHNQGIPIVANPPLARALYQV ELGDAIPEPLFETVAVVLRWVDELGRDHGDGDGALPC |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcU | YP_362157.1 | type III secretion system protein HrcU | Virulence | Hrp PAI | Protein | 1e-126 | 99 |
| hrcU | AAP34345.1 | HrcU | Virulence | Hrp PAI | Protein | 6e-123 | 95 |
| hrcU | NP_640761.1 | type III secretion system protein HrcU | Virulence | Hrp PAI | Protein | 2e-122 | 94 |
| hrcU | YP_198724.1 | type III secretion system protein HrcU | Virulence | Hrp PAI | Protein | 2e-122 | 94 |
| hrcU | BAB07858.1 | HrcU | Virulence | Hrp PAI | Protein | 1e-121 | 93 |
| XC_3012 | YP_244080.1 | type III secretion system protein HrcU | Virulence | Hrp PAI | Protein | 1e-105 | 82 |
| hrcU | NP_636604.1 | type III secretion system protein HrcU | Virulence | Hrp PAI | Protein | 1e-105 | 82 |
