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Name : hrcV (XACM_0395) Accession : YP_004850002.1 Strain : Xanthomonas axonopodis F1 Genome accession: NC_016010 Putative virulence/resistance : Virulence Product : HrcV protein Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4789 EC number : - Position : 444317 - 446203 bp Length : 1887 bp Strand : - Note : COG4789; U Intracellular trafficking, secretion, and vesicular transport DNA sequence : GTGGCGATCGCCGCCCTGGTCGTGGCGGTCATCGGGCTGATGATCCTGCCGCTGCCAACGCCCATGATCGATACGTTGCT GGGCATCAACATCACCCTGAGCGTGGTGCTGTTGATGGTCACGATGTATGTGCCCGACTCGATCTCGCTCTCGTCGTTTC CTTCCCTGCTGCTGTTCACCACGCTACTGCGGCTGTCCTTGAATATCGCCTCGACGAAGTCGATCCTGCTGCATGCCGAG GCGGGCCATATCATCGAGAGCTTCGGCGAGCTGGTGGTCGGCGGCAATCTGGTGGTGGGCCTGGTGGTTTTCTTGATCAT CACCACCGTGCAGTTCATCGTGATCGCAAAGGGTTCCGAACGCGTTGCCGAGGTCGGTGCGCGCTTCACGTTGGACGCAA TGCCCGGCAAGCAGATGAGTATCGATGCCGACCTGCGTGGCGGCAACCTGACCGCAGATGAGGCACGCCGCAAACGCGCG CGGCTGGCCATGGAAAGCCAACTGCACGGCGGCATGGATGGCGCCATGAAATTCGTCAAGGGTGATGCGATCGCCGGCCT GGTGATTACCATGGTCAACATCCTGGCCGGTATCGTGGTCGGCGTGACGTACCACGGCATGACGGCCGGCGACGCCGCCA ACCGCTTTGCGATCCTGTCGGTAGGCGATGCGATGGTGTCGCAGATCGCCTCACTGCTGATATCGGTGGCCGCCGGCGTC ATGATCACCCGCGTGGCCAACGAGAACGAGACCAGGCTCAGCTCGCTCGGGCTCGATATCGGCCGTCAGCTCACCAGCAA TGCGCGGGCCCTGATGGCAGCGAGCGTGCTGCTGGCCTGCTTTGCGTTCGTCCCCGGCTTTCCCGCCGTGCTGTTCCTGC TGCTGGCAGCGGCCGTCGGCGCCGGCGGCTATACGATCTGGCGCAAGCAACGCGACATCAGCGGCACCGATCAGCGCAAG TTGCCTTCGGCGAGCCGTAAAGGTGCCAAAGGCGAGGCGCCACATATCCGCAAAAACGCCCCGGATTTCGCCTCCCCTTT GTCGATGCGGCTGTCGCCGCAGCTGGCCGCTCTGCTCGACCCTGCGCGGCTGGATCAGGCGATCGAAAGCGAGCGGCGGC AATTGGTCGAACTGCTGGGCTTGCCGTTTCCCGGGATCGCGATATGGCAGACCGAGTCGCTGCAAGGCATGCAATACGAA GTGTTGATTCACGATGTCCCCGAGACACGCGCCGAACTGGAGAACACCGACGACATGCAGGCCGCACTGGCCCGGCAGGC CATCGCACCCCTGCATGCACGGGCGCACTTGTTCGTCGGCATCCAGGAGACGCAGTGGATGCTGGAGCAGGTGGCCGTGG ACTACCCCGGGCTGGTTGCGGAGGTCAACAAGGCGATGCCCGCCCAGCGCATAGCCGATGTGTTGCGGCGTCTTCTGGAA GAAAGGATTCCGGTGCGCAATATCAAGAGCATCCTGGAGAGTCTGGTGGTCTGGGGGCCGAAGGAAAAGGATCTTCTGAT GTTGACCGAATATGTGCGCTGCGATCTGGGCCGTTATCTGGCGCATACCGCAACCGCAGGCACCGGGCAGCTGCCCGCGG TAATGCTCGACCATGCTGTCGAACAACTGATCAGGCAATCGATTCGCGCGACCGCGGCCGGCAATTTCCTGGCACTTCCG CCCGAGCAGGCGAACCAGCTTGTCGAACAGGTGGAACGCATCGTCGGCGACCATGCGCAGCATCCGCTGGCGGTGGTCGC GTCGATGGACGTGCGCAGATATGTGCGCCGCATGATCGAAGCACGGCTGACCTGGCTGCAGGTCTATTCGTTCCAGGAGC TGGGTTCGGAGGTGCAGCTGCAGCCGATCGGTAGAGTGGTGGTGTGA Protein sequence : MAIAALVVAVIGLMILPLPTPMIDTLLGINITLSVVLLMVTMYVPDSISLSSFPSLLLFTTLLRLSLNIASTKSILLHAE AGHIIESFGELVVGGNLVVGLVVFLIITTVQFIVIAKGSERVAEVGARFTLDAMPGKQMSIDADLRGGNLTADEARRKRA RLAMESQLHGGMDGAMKFVKGDAIAGLVITMVNILAGIVVGVTYHGMTAGDAANRFAILSVGDAMVSQIASLLISVAAGV MITRVANENETRLSSLGLDIGRQLTSNARALMAASVLLACFAFVPGFPAVLFLLLAAAVGAGGYTIWRKQRDISGTDQRK LPSASRKGAKGEAPHIRKNAPDFASPLSMRLSPQLAALLDPARLDQAIESERRQLVELLGLPFPGIAIWQTESLQGMQYE VLIHDVPETRAELENTDDMQAALARQAIAPLHARAHLFVGIQETQWMLEQVAVDYPGLVAEVNKAMPAQRIADVLRRLLE ERIPVRNIKSILESLVVWGPKEKDLLMLTEYVRCDLGRYLAHTATAGTGQLPAVMLDHAVEQLIRQSIRATAAGNFLALP PEQANQLVEQVERIVGDHAQHPLAVVASMDVRRYVRRMIEARLTWLQVYSFQELGSEVQLQPIGRVVV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcV | YP_362156.1 | HrcV protein | Virulence | Hrp PAI | Protein | 0.0 | 99 |
| hrcV | AAP34346.1 | HrcV | Virulence | Hrp PAI | Protein | 0.0 | 99 |
| hrcV | NP_640760.1 | HrcV protein | Virulence | Hrp PAI | Protein | 0.0 | 99 |
| hrcV | YP_198723.1 | protein HrcV | Virulence | Hrp PAI | Protein | 0.0 | 98 |
| hrcV | BAB07859.1 | HrcV | Virulence | Hrp PAI | Protein | 0.0 | 98 |
| XC_3013 | YP_244081.1 | HrcV protein | Virulence | Hrp PAI | Protein | 0.0 | 95 |
| hrcV | NP_636603.1 | protein HrcV | Virulence | Hrp PAI | Protein | 0.0 | 95 |
| lssD | AAO18050.1 | LssD | Virulence | TTSS locus | Protein | 5e-99 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| hrcV | YP_004850002.1 | HrcV protein | VFG0064 | Protein | 2e-104 | 45 |
| hrcV | YP_004850002.1 | HrcV protein | VFG0384 | Protein | 3e-96 | 42 |
| hrcV | YP_004850002.1 | HrcV protein | VFG0198 | Protein | 6e-92 | 42 |
