Gene Information

Name : hrcQ (XACM_0393)
Accession : YP_004850000.1
Strain : Xanthomonas axonopodis F1
Genome accession: NC_016010
Putative virulence/resistance : Virulence
Product : HrcQ protein
Function : -
COG functional category : N : Cell motility
COG ID : COG1886
EC number : -
Position : 442633 - 443637 bp
Length : 1005 bp
Strand : -
Note : COG1886; N Cell motility; U Intracellular trafficking, secretion, and vesicular transport

DNA sequence :
TTGCTAACCGAGCAGAGCCAGACTCCACCGGCACGTGCACTCTCTCAGGCGTTGACGCGCGTTGCTGCCGAGCGCGCCCA
GCTGGGCAGAGTGTTCGGCGACCCACGCGCAGCACGCCAATGCGGCTTTGCCACGCATTGCCGTCGCATCTGGCCCAACG
ATGCGGCCCGCCTGCGCCTGCAGCTGGATGCCGGCCAGATGGATTTGCGAATTACCGCGCGCGACGGCCTGGCGTTGCTA
TTGAACGAGGACGACGACGCACTACGCGTTTCGATCGCGGGAATGCTGCTGGCCGATCGCCTGGGCGCATTTGCGCCGCT
CGGCCTGGGCGCTGCCGAGGTGATCGCCTTCGAGCGCGATGCAGAGCCAGACGACTGCCACGGCATCGGCATGACACTGG
GCGATCTCGATGCCGTTGCGCTGACGGCGAGCGCGTCGCTGCTGGCCACGTTGCAGGCCGCAGTCGGCGGACTTACGCCG
CCCACGCAGCTGCCAGCCTGGCTGGCTGCACTGCGCGTCAACACGCGCCTGCGCATCGGCGGGCGCACCGCATCGGCGGC
ATTGCTTCAGTCGCTGCGGCCTGGCGATGTCTTGCTGCATTGCACGGACTCGGCTGCGGTGACCAGCGGCGATGTGCTCT
GGGGTATCGCCGGAGGCGTGGTATTGCGCGCGCCGGTGCGCTTGAACCTGCAACAGATGATCCTGGAGGCCAGCCCCACC
ATGCAGCACGATACGTTTGAGCCGGAAGTCGCGCCGTCCACCAGCAACGTGGCAGAACTGGAACTGCCGGTGCAGCTGGA
AGTGGATCAACTTGCGCTGTCTCTATCGACCTTGTCGGGTTTACAGCCCGGGCAGATCCTGGAGTTGTCGGTGCCGGTCG
ATCAAGCCGACATCCGCCTGGTCGTTTACGGCCAGACCATCGGCACCGGCAGGCTGCTGGCAGTGGGCGAACATCTGGGT
GTGCAGATCCTCAGCATGTCGGAGAGCACGCATGCAGATGCCTGA

Protein sequence :
MLTEQSQTPPARALSQALTRVAAERAQLGRVFGDPRAARQCGFATHCRRIWPNDAARLRLQLDAGQMDLRITARDGLALL
LNEDDDALRVSIAGMLLADRLGAFAPLGLGAAEVIAFERDAEPDDCHGIGMTLGDLDAVALTASASLLATLQAAVGGLTP
PTQLPAWLAALRVNTRLRIGGRTASAALLQSLRPGDVLLHCTDSAAVTSGDVLWGIAGGVVLRAPVRLNLQQMILEASPT
MQHDTFEPEVAPSTSNVAELELPVQLEVDQLALSLSTLSGLQPGQILELSVPVDQADIRLVVYGQTIGTGRLLAVGEHLG
VQILSMSESTHADA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcQ AAD21320.1 HrcQ Virulence Hrp PAI Protein 7e-91 97
hrcQ YP_362154.1 HrcQ protein Virulence Hrp PAI Protein 1e-108 97
hrcQ BAB07861.1 HrcQ Virulence Hrp PAI Protein 1e-103 92
hrcQ YP_198721.1 hypothetical protein Virulence Hrp PAI Protein 4e-116 92
hrcQ NP_640758.1 HrcQ protein Virulence Hrp PAI Protein 1e-96 90
hrcQ AAP34348.1 HrcQ Virulence Hrp PAI Protein 2e-96 89
XC_3015 YP_244083.1 HrcQ protein Virulence Hrp PAI Protein 9e-79 73
hrcQ NP_636601.1 HrcQ protein Virulence Hrp PAI Protein 9e-79 73