|
Name : hrcD (XACM_0389) Accession : YP_004849996.1 Strain : Xanthomonas axonopodis F1 Genome accession: NC_016010 Putative virulence/resistance : Virulence Product : HrcD protein Function : - COG functional category : - COG ID : - EC number : - Position : 439978 - 440916 bp Length : 939 bp Strand : - Note : - DNA sequence : ATGACCATGCAGCTTCGCGTACTGACAGGAACCCACGCAGGCGCACGATTAGATTTGGCGCAAGGTCGCTACACCCTGGG GAGCGATCCACAAACCGATATCCGAATAGACGATTGGCCTGGTTGCTCACTCATTATCGAGGTAGACCAAGATGGTCAGA TCCGCTATAGCAGCGACACGGTGCAAGAAACGTTCTTTGTTGCATTTCAGCCGGTCCGCTTCGGCCCGCTGGTGCTATGC GTTGGCGATGCTGCTGCCGATTGGCCGGACGATGTGGCGCTACTGGAGCGGCTGCTTTCCCCAGCACCGCCGCCGGCGCC GCGCACGTCCAGGCGCAAAGTCTTGCGTACTGCGGTGGGCGCCGTGCTAGCGCTTGCCGCCGCAGCGTTGCTCCCCTCGT TGCAGCCGGCGTTTCTGTCCGATGCCGCCACCCGGCAGCATCCGGAAAATACCCTCAATCAGGCCAAAGCCTTATTGAAG CAGCTGGGCTTGCGCGAAGCGCACGCAGAACAGGTCGGCACGCGCGTGCTGATCGAAGGTCTGGTCCCCAGCAGCGCCGA TGCCGCACGCTTGCGTGCGCAGGTGCATCGCTATCACCCAGGCGTTGCCGTCAACGTGGCGGTGGTGGACGAGGTCGTGG CGACGCTGCGCGACACCCTGGCCGACCCCGCCCTCACCGTCCGTTACGAGGGCAATGGCGTTTTCTCGGTTTCCGGCAGC AGCGACTACGCAGAACGCGCAAGCCGCCGGATTGCCGACGTCCGCAGCGACCTGGGCCCGGAGGTCCGCGCGCTGCACGT GGAGATCAGCCAGCAAGACCCGTCCATCAAACCACCGGACAATTACGACGCGGCATTGCTCGCCGATGGCCTGCACTATG TCGAAACGCCGGATGGCACCAAGCACATGACATCCCTGCCGCAGCAAGCGGCGCAATGA Protein sequence : MTMQLRVLTGTHAGARLDLAQGRYTLGSDPQTDIRIDDWPGCSLIIEVDQDGQIRYSSDTVQETFFVAFQPVRFGPLVLC VGDAAADWPDDVALLERLLSPAPPPAPRTSRRKVLRTAVGAVLALAAAALLPSLQPAFLSDAATRQHPENTLNQAKALLK QLGLREAHAEQVGTRVLIEGLVPSSADAARLRAQVHRYHPGVAVNVAVVDEVVATLRDTLADPALTVRYEGNGVFSVSGS SDYAERASRRIADVRSDLGPEVRALHVEISQQDPSIKPPDNYDAALLADGLHYVETPDGTKHMTSLPQQAAQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrpD5 | AAD21325.1 | HrpD5 | Virulence | Hrp PAI | Protein | 9e-110 | 99 |
| hrcD | YP_362150.1 | HrcD protein | Virulence | Hrp PAI | Protein | 1e-109 | 99 |
| hrpD5 | YP_198717.1 | protein HrpD5 | Virulence | Hrp PAI | Protein | 2e-102 | 94 |
| hrpD5 | BAB07865.1 | HrpD5 | Virulence | Hrp PAI | Protein | 2e-102 | 94 |
| hrpD5 | NP_640754.1 | HrpD5 protein | Virulence | Hrp PAI | Protein | 7e-105 | 92 |
| unnamed | AAP34352.1 | HrpD5 | Not tested | Hrp PAI | Protein | 6e-105 | 92 |
| XC_3019 | YP_244087.1 | HrpD5 protein | Virulence | Hrp PAI | Protein | 6e-83 | 74 |
| hrpD5 | NP_636597.1 | HrpD5 protein | Virulence | Hrp PAI | Protein | 6e-83 | 74 |
