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Name : hpaF (XACM_0381) Accession : YP_004849988.1 Strain : Xanthomonas axonopodis F1 Genome accession: NC_016010 Putative virulence/resistance : Virulence Product : HpaF LRR protein Function : - COG functional category : S : Function unknown COG ID : COG4886 EC number : - Position : 429952 - 431541 bp Length : 1590 bp Strand : - Note : COG4886; S Function unknown DNA sequence : ATGTCGCGGGAAGTACTGCAAAACGCCGCAGACGCCATCCGCCGTGCAGCGAGCCGCCGCAGCACCGAAGTTGTCGTCGA CTGCCTGCCTGCCACGACGCTACCTGACGCGATCGGCCGGCTCGACGCGCTACAGAAATTGACGCTGCTCCATACCGGGC TTCAGTCGCTGCCAGACAGCCTGGGGCAGCTGCGCCAGCTCCGCCATTTGCAGATCACTGGCGCGCCGGACCTGAAGACG CTGCCGCCCTCGTTGACGCGCCTGTCCAATCTCAGAACCCTTCAATTGACGATGGTCCCGTTGGACGAATTACCCGCAGA CCTTGGGCGCATGCAGGGTCTGCGCGGCCTCGCGCTAGGTCGCGGGCACTATGCGCGCCTGCCGGACAGCATCGTCGAAC TGAGCCGGTTGAGCGAGTTGCGCGTGTCGCACTCGTCGCATTTTCGCCAGTTGCCTGAAAACATCGGCCTCATGCAGGGG CTCAGGTCACTGGAGGTGGCATCGAATTCCAAGCTGGAGCAGCTGCCAGGCAGCCTCACGCAGCTGCATCGGCTGGAAAA ACTCGACCTGTCATCCAACCGCCGGCTGGCACACTTGCCTGAGGACATCGGGCAACTGCGCGGCTTGACGGAACTGTCGC TGAGAAGTTGCACTGCGCTGCAGCAGCTGCCCGACAGCGTGGGGGATCTGGCCCAGCTGCAACTGCTGGACCTGCGCGAC ACGGGCCTGCAGACTCTTCCACAGTCGCTGGCACGACTGCCCGCTCAATGCGATATCAAGGTGCCGGATCATCTGGCAGA CCGATTGCTGCAGATCCGCGACCCGGAGCGGGCGCAGCGCCAGGCACAGCGCGCGGCACAGCGGCTGGCCGAGCGGAGAC GACGCGCGCCCGTGCCGGCGGCGCAACAGGCCGGGTCGTCGTGGAACCGCGTCCCCGAGTTCACGCGCGTGTTGCGCAGT GTCGATGCCGACCTGGGCGAGCGTTTTGAGAAATGGACGCAAGGCCTGATGCAAAATGCCAGGATGTTTGGCGCATCCAT CACATCGGCCGACATGCCCCTGCTGGACCAGGTGGTAGCCGAGGCCATTCGGTCACCCGAATTCCGCAGCAGCTTCGGCC AATTCTTGAGCGACCACACCATCAAGACGCTCAACCTGGATGGCATGACGCAAGTGGGTGGGCGCGGGCCCGCCGTGCGA GGAGACGCCAAAACCGCGTTTGCCGAGATGCTCAAGCACAAGCTCATGCACACGCAGGACCACCAGACCGCACTGGGCCT GCTGCTGGAAGCCCTGAGGAATTCCGACCTGGGGCTGTCCAGGGAGACGCTGCTGCGCAGCAGGAATGAACTCACCGGGC GTGTGGAAATGTGGCCGCCACTGAAGGCCTACATCTCCATGCACGATGTGGAAGGAAAAGCGGCGCAGGATGCGGCGGTC ACGTGGGCGATGGCTCAGTTTGACAAAGCGCATGAGGGTGTCATCGGGGAAGCGGAGGCCAAGCAGGAGTCCGAGCAGGC GCAGGCCAACGCGAACCGCTTCATCGAGCGGCGGGCGCGTGTACTGCTCCAGGAATGGGGCATCCATTAG Protein sequence : MSREVLQNAADAIRRAASRRSTEVVVDCLPATTLPDAIGRLDALQKLTLLHTGLQSLPDSLGQLRQLRHLQITGAPDLKT LPPSLTRLSNLRTLQLTMVPLDELPADLGRMQGLRGLALGRGHYARLPDSIVELSRLSELRVSHSSHFRQLPENIGLMQG LRSLEVASNSKLEQLPGSLTQLHRLEKLDLSSNRRLAHLPEDIGQLRGLTELSLRSCTALQQLPDSVGDLAQLQLLDLRD TGLQTLPQSLARLPAQCDIKVPDHLADRLLQIRDPERAQRQAQRAAQRLAERRRRAPVPAAQQAGSSWNRVPEFTRVLRS VDADLGERFEKWTQGLMQNARMFGASITSADMPLLDQVVAEAIRSPEFRSSFGQFLSDHTIKTLNLDGMTQVGGRGPAVR GDAKTAFAEMLKHKLMHTQDHQTALGLLLEALRNSDLGLSRETLLRSRNELTGRVEMWPPLKAYISMHDVEGKAAQDAAV TWAMAQFDKAHEGVIGEAEAKQESEQAQANANRFIERRARVLLQEWGIH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hpaG | YP_362139.1 | HpaG LRR protein | Virulence | Hrp PAI | Protein | 9e-166 | 98 |
| hpaG | AAL78291.1 | HpaG | Virulence | Hrp PAI | Protein | 6e-166 | 98 |
| hpaF | NP_640748.2 | HpaF protein | Virulence | Hrp PAI | Protein | 0.0 | 87 |
| hpaF | AAP34359.1 | HpaF | Virulence | Hrp PAI | Protein | 0.0 | 87 |
| hpaF | YP_198704.6 | protein HpaF | Virulence | Hrp PAI | Protein | 0.0 | 86 |
| hpaF | BAB63151.1 | hrp-associated protein | Virulence | Hrp PAI | Protein | 0.0 | 86 |
