Gene Information

Name : XACM_3533 (XACM_3533)
Accession : YP_004853077.1
Strain : Xanthomonas axonopodis F1
Genome accession: NC_016010
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 4121105 - 4121824 bp
Length : 720 bp
Strand : +
Note : COG1136; V Defense mechanisms

DNA sequence :
ATGCTCAAGATGCAAGCGGTCTCCAAGGTCTTCCGCACCGAACAGGTGGAAACGCATGCGCTGCGGTCGCTGGACCTGCA
TGTGCGCGAAGGCGAGTTCGTCGCGGTCACCGGCCCCTCCGGCTCGGGCAAGACCACCTTCCTCAACCTGGCCGGGCTGC
TGGAAACCTTCACCAGCGGGCAGTATCTGCTCGATGGCGAAGACGTCAGCCATCTGTCCGACGATGCACGTTCGCGCCTG
CGCAACCGCAAGATCGGCTTCATCTTCCAGGGCTTCAATCTGATTCCCGACCTCAACCTGTTCGACAACGTCGATGTGCC
GCTGCGGTATCGCGGCATGGCGGCAGCCGAGCGCAAGCAGCGCATCGAAGAGGCACTGACCAAGGTCGGCCTGGGCTCGC
GCCTGCGTCACTACCCCACCGAACTCTCCGGTGGGCAACAGCAGCGCGCTGCGATTGCGCGCGCACTGGCCGGCAGTCCA
CGCCTGCTGCTGGCCGACGAACCCACCGGCAACCTCGATTCGCAAATGGCGCGCGGGGTGATGGAACTGCTGGAAGAGAT
CAACAGCCAGGGCACCACCATCGTCATGGTCACCCACGATCCGGAACTGGCCGCACGCGCGCAGCGCAACGTGCACATCG
TCGACGGGCAGGCCACCGACCTGGAACGCAATCCCAGCCTGATGCGCACGCCTGCCGCCGTTGCAACCCTGGCCGACTGA

Protein sequence :
MLKMQAVSKVFRTEQVETHALRSLDLHVREGEFVAVTGPSGSGKTTFLNLAGLLETFTSGQYLLDGEDVSHLSDDARSRL
RNRKIGFIFQGFNLIPDLNLFDNVDVPLRYRGMAAAERKQRIEEALTKVGLGSRLRHYPTELSGGQQQRAAIARALAGSP
RLLLADEPTGNLDSQMARGVMELLEEINSQGTTIVMVTHDPELAARAQRNVHIVDGQATDLERNPSLMRTPAAVATLAD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-26 43
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 6e-28 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-27 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 9e-27 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
XACM_3533 YP_004853077.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 6e-39 49
XACM_3533 YP_004853077.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 1e-43 48
XACM_3533 YP_004853077.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 3e-32 46