Gene Information

Name : XACM_3502 (XACM_3502)
Accession : YP_004853046.1
Strain : Xanthomonas axonopodis F1
Genome accession: NC_016010
Putative virulence/resistance : Resistance
Product : cystathionine gamma-synthase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : -
Position : 4086749 - 4087936 bp
Length : 1188 bp
Strand : -
Note : COG0626; E Amino acid transport and metabolism

DNA sequence :
ATGTCCAATCGCACCACTCATAGCCATGACGGCGAGCGCGCGCTGTCGCTCGCAACGCTGGCGATCCATGGAGGGCAGTC
GCCAGATCCGAGCACCGGCGCGGTAATGCCGCCGATCTATGCGACGTCCACCTATGCGCAGTCCAGCCCCGGCGAGCACC
AGGGTTTCGAATATTCGCGCACCCACAACCCCACGCGCTTCGCCTACGAGCGTTGCGTTGCCGCGCTGGAAGGCGGTACG
CGCGCATTTGCGTTCGCTTCCGGCATGGCTGCCACCTCGACGGTGATGGAGTTGCTGGATGCCGGCAGCCACGTGGTGGC
GATGGACGACCTGTACGGCGGCACCTTCCGCCTGTTCGAGCGCGTGCGCCGTCGCACCGCCGGCCTGGATTTCAGCTTCG
TCGACCTGACCGACCCGGCCGCCTTCGAAGCTGCAATCCGCCCCGACACCAAGATGGTGTGGATCGAAACCCCGACCAAC
CCGATGCTCAAGCTGGTCGATATCGCTGCCATTGCAGCGATTGCGCGCAAGCACGGCCTGTTGATCGTGGTCGACAACAC
GTTCGCTTCCCCGATGCTGCAGCGCCCGCTCAGCCTGGGTGCGGATATCGTCGTGCACTCGGCCACCAAGTATCTCAACG
GCCACTCGGACATGGTCGGCGGCATCGCGGTGGTTGGCGACAACGCCGAGCTCGCCGAGCAGATGGCGTTCCTGCAGAAC
TCCATCGGTGGCGTCCAGGGCCCGTTCGACAGCTTCCTCGCCCTGCGCGGCCTCAAGACCCTGCCGCTGCGCATGCGCGC
GCATTGCGAGAATGCCCTGGCGCTCGCGCAATGGCTGGAAACCCACCCTGCGATCGAAAAGATCATTTACCCCGGCCTTG
CTTCGCACCCGCAGCATGCGCTCGCGAAAACCCAGATGTCCGGCTTCGGCGGAATCGTCTCCATCGTCCTCAAGGGCGGC
TTCGACGCAGCCAAGCGTTTTTGCGAAAAGACCGAATTGTTCACCCTGGCCGAATCGCTCGGTGGCGTGGAAAGCCTGGT
CAACCATCCCGCCGTCATGACGCATGCCTCCATTCCGGTTGCCCGCCGTGACCAGCTTGGTATCAGCGATGCGCTGGTGC
GGTTGAGCGTGGGGATTGAAGATGTGGGGGATTTGCGTGGGGATTTGGAGTGGGCGCTGAAAGACTGA

Protein sequence :
MSNRTTHSHDGERALSLATLAIHGGQSPDPSTGAVMPPIYATSTYAQSSPGEHQGFEYSRTHNPTRFAYERCVAALEGGT
RAFAFASGMAATSTVMELLDAGSHVVAMDDLYGGTFRLFERVRRRTAGLDFSFVDLTDPAAFEAAIRPDTKMVWIETPTN
PMLKLVDIAAIAAIARKHGLLIVVDNTFASPMLQRPLSLGADIVVHSATKYLNGHSDMVGGIAVVGDNAELAEQMAFLQN
SIGGVQGPFDSFLALRGLKTLPLRMRAHCENALALAQWLETHPAIEKIIYPGLASHPQHALAKTQMSGFGGIVSIVLKGG
FDAAKRFCEKTELFTLAESLGGVESLVNHPAVMTHASIPVARRDQLGISDALVRLSVGIEDVGDLRGDLEWALKD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 7e-83 51
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 5e-84 51
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 3e-58 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
XACM_3502 YP_004853046.1 cystathionine gamma-synthase BAC0207 Protein 4e-70 47