Gene Information

Name : ugd2 (XACM_3476)
Accession : YP_004853020.1
Strain : Xanthomonas axonopodis F1
Genome accession: NC_016010
Putative virulence/resistance : Virulence
Product : UDP-glucose dehydrogenase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1004
EC number : -
Position : 4058344 - 4059510 bp
Length : 1167 bp
Strand : -
Note : COG1004; M Cell wall/membrane/envelope biogenesis

DNA sequence :
ATGAAGATCGCTGTCGCGGGTACCGGCTATGTCGGTCTGTCCAATGGCGTATTGCTCGCCAAGCACCATGAGGTGGTGGC
GCTGGACATCGTCGAGTCCAAGGTGAAGCTGCTCAACGAAGGCCGCTCGCCGATCGTCGACAAGGAACTCGAGGCCGCGC
TGGCCCAAGGTGGCTTGAACTTCAAGGCCACCCTGGACGCCAAGGAGGCGTTTGCCGGCGCAGAGTTCGTGATCATCGCT
ACGCCCACCGACTACGATCCGGACACCAACTATTTCAACACTGGGTCGATCGAGGTCGTGATCGCCAAGGTGCTGGAGAT
CAATCCGCAGGCGACCATGGTGATCAAGTCGACCATTCCGGTCGGCTACGTCGCCAAGCTGCGCGCGCAGTTCGGTACCG
ACAACATCATCTTCTCGCCCGAATTCCTGCGCGAAGGCCGGGCGTTGTACGACAACCTGTACCCGTCCCGGATCATCGTC
GGCGAGCGTTCGGCGCGTGCGGAAACCTTCGCGCGGCTGTTGCAGGAAGGCGCGCTCAAGCCCGACGTGCCGGTGTTATT
CACCGAGCCGACCGAGGCCGAGGCGATCAAGCTGTTCGCCAATACCTACTTGGCGATGCGCGTGTCCTACTTCAACGAAC
TGGACACCTACGCGCTTACCCATGGGTTGGATAGCCGCCAGATCATCGAGGGCATCTGCCTGGATCCGCGTATCGGCAGC
CACTACAACAATCCTTCCTTCGGCTATGGCGGTTACTGCCTGCCCAAGGACACCAAGCAGTTGCTGGCCAACTACCAGAG
CGTGCCGCAGAACATCATCCGGGCGATCGTCGATTCCAACACGACCCGCAAGGACTTCATTGCCGCCGACGTGCTACGGC
GCAATCCCAAGGTGGTCGGCATCTATCGACTGATCATGAAGGCCGGGTCGGACAATTTCCGGTCGTCCAGCATCCAGGGA
GTGATGAAGCGCCTCAAGGCCAAGGGCGTGGACGTCATCGTGTACGAGCCGACGCTGAGCGATCATGAGTTCTTCCGTTC
GCGCGTGGTCAACGACCTGGAGGCCTTTAAGCGCGAAGCCGATGTCATCATCAGCAACCGCATGGCCGACGCGCTGCAGG
ATGTGCAGGACAAGGTGTATACGCGCGACCTGTTCGGCGACAACTGA

Protein sequence :
MKIAVAGTGYVGLSNGVLLAKHHEVVALDIVESKVKLLNEGRSPIVDKELEAALAQGGLNFKATLDAKEAFAGAEFVIIA
TPTDYDPDTNYFNTGSIEVVIAKVLEINPQATMVIKSTIPVGYVAKLRAQFGTDNIIFSPEFLREGRALYDNLYPSRIIV
GERSARAETFARLLQEGALKPDVPVLFTEPTEAEAIKLFANTYLAMRVSYFNELDTYALTHGLDSRQIIEGICLDPRIGS
HYNNPSFGYGGYCLPKDTKQLLANYQSVPQNIIRAIVDSNTTRKDFIAADVLRRNPKVVGIYRLIMKAGSDNFRSSSIQG
VMKRLKAKGVDVIVYEPTLSDHEFFRSRVVNDLEAFKREADVIISNRMADALQDVQDKVYTRDLFGDN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0068 YP_300158.1 UDP-glucose 6-dehydrogenase Not tested SCC15305cap Protein 1e-93 58

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ugd2 YP_004853020.1 UDP-glucose dehydrogenase VFG0963 Protein 2e-102 58