Gene Information

Name : gtrB (XACM_2968)
Accession : YP_004852519.1
Strain : Xanthomonas axonopodis F1
Genome accession: NC_016010
Putative virulence/resistance : Virulence
Product : cell wall biogenesis glycosyltransferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0463
EC number : -
Position : 3410785 - 3411831 bp
Length : 1047 bp
Strand : -
Note : COG0463; M Cell wall/membrane/envelope biogenesis

DNA sequence :
GTGAGCACGATCGAGACTGCGCAACTGCCGCCGGCACCCGAACGCCTGACGGTGCTCATCGCGGCCTTCAATGAAGAAAC
CAGCATTCCGCTGCTGCATCCGCGCCTGTGCGCGGTGTTGGCGCAGCTGCCCGGACTTCAGACGCACGTGCTGTATGTCG
ACGACGGCAGCACCGATGGCACCTGGGAGGTGTTGCATGCGCTGACCGAAGCGGATGCGCAGGTGAGTGCGGTGCGGTTG
TCGCGCAATTTCGGCAAGGAAGTGGCGATTTCTGCCGGACTGGACCACGTGCTCCCGGGTGCGGTGGTGTTGCTCGATGC
CGATGGCCAGGATCCGCCGGAGCTGATCCCGGAATTCGTTGCGCTATGGCGTGGCGGCTACGACAACATCTTCGGTACGC
GGGTCATTCGCGAGGGCGAGAGTTGGCTCAAGCGTAGCGCTGCGCACGCGTTTTATCGGGTGATCCGGCGCTTGTCGCGT
ACCCCGATTCCTGCCGATACCGGCGATTTCCGCTTGCTGTCGCCGCGTGTCGTGCAAGCCTTGCAGCAGCTGCGCGAGCG
CCACCGTTTCATGAAGGGGCTCTTCGGCTGGGTCGGGTTTCGCCAGGTAGCGCTGCCGTATCGGCGTGAGCCGCGTCTGT
CTGGGCACAGCAAGTTCACGGTATGGCGGCTGTGGAATTTCGCGCTCGATGGCATTACCAGTTTTTCCACGGTGCCGCTG
CGCGCGGCAACATATCTGGGCCTGCTGACCGCGGTGCTGGCGTTCCTGTTCGGCGCGTGGGTCGTCATCAAGGCTGCGCT
GATGGGCGACCCAGTGGCCGGGTGGCCGACGCTGATGTCGGTGATCCTGTTTCTGGGGGGCGTTCAGCTGATTGCCCTGG
GCCTGATTGGCGAATACCTGGGCCGCCTGTACGACGAGGCCAAGCAGCGCCCGCTGTATCTGGTCGATACCCACCGCGGC
GCGGTGGGAGTAGTCTGCGATCACCAGACCAAGCGCGGAGCGGGCCATGCAGACCGTACGACAGCTGTTGGGGACCAAGC
AGGTTGA

Protein sequence :
MSTIETAQLPPAPERLTVLIAAFNEETSIPLLHPRLCAVLAQLPGLQTHVLYVDDGSTDGTWEVLHALTEADAQVSAVRL
SRNFGKEVAISAGLDHVLPGAVVLLDADGQDPPELIPEFVALWRGGYDNIFGTRVIREGESWLKRSAAHAFYRVIRRLSR
TPIPADTGDFRLLSPRVVQALQQLRERHRFMKGLFGWVGFRQVALPYRREPRLSGHSKFTVWRLWNFALDGITSFSTVPL
RAATYLGLLTAVLAFLFGAWVVIKAALMGDPVAGWPTLMSVILFLGGVQLIALGLIGEYLGRLYDEAKQRPLYLVDTHRG
AVGVVCDHQTKRGAGHADRTTAVGDQAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gtrBI AAF09026.1 GtrBI Not tested SHI-O Protein 2e-64 43
ESA_03027 YP_001439092.1 hypothetical protein Not tested Not named Protein 6e-66 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
gtrB YP_004852519.1 cell wall biogenesis glycosyltransferase VFG0670 Protein 1e-65 44