Gene Information

Name : XACM_2923 (XACM_2923)
Accession : YP_004852474.1
Strain : Xanthomonas axonopodis F1
Genome accession: NC_016010
Putative virulence/resistance : Virulence
Product : amino acid transporter
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0531
EC number : -
Position : 3349839 - 3351221 bp
Length : 1383 bp
Strand : +
Note : COG0531; E Amino acid transport and metabolism

DNA sequence :
ATGACCGACACGCCCCGCCGCGACGATGCGGCCACGCTGCAACGCTTCGGCTACGCACAGGAGCTCAAGCGGCAGCTCAC
GCTGAAGGATCTGTTGATCTACGGGCTGGTGTGCATGGTGCCCACGGCGCCGTTCTCGATCTTCGGCGGCGTCTTCGACA
TCAGTGCCGGGATGGTGCCGCTGACCTACCTGGTCGGCTTCGTGGCAATGCTGTTCACCGCACTGAGCTACCAGCAGATG
TCGCAGGCATTTCCGGTGGCCGGTTCGGTATATGCCTATGTCGGGCGCGGGCTGAGCAGCGGCATGGGGTTTCTGGCTGG
CTGGGCGATTCTGCTCGACTACCTGCTGGTGCCGACCCTGTTGTACGTGGTCGGCGCCAATGCGATGCAGACCGTATTGC
CGGCGATACCGCAGCCGGCGTGGATTGGGTTCTTCGTGGTGCTCAACACGGTGGTGAACCTGCGTGGCATCGAAACCACC
GCACGCGCCAATCGCTTTTTCCTGCTTGCGCAGTTGCTGGTCCTGGCGGTGTTCGTGGTGCTGGCGACGCTGGCGATCCA
GCGCGGCGTCAATGGCGCGCACTGGAGCTGGCGCCCCCTGTATAACCCGCAGGCGTTTTCTCCGCAGCTGATCTTCAGCG
CGTTGTCGGTGGCGGTGGTGTCGTTCCTCGGCTTCGATGCGATCTCCACCATGTCCGAGGAAGCGCGCGGCGGCAACCGC
GTGGTGGGGCGCGCAACCTTGCTGGCCTTGCTGATCGTGGCAGGGCTGTTCATCCTGCAAACCTGGCTGGCGGCATTGCT
GCAGCCTACCCTGCAGTGCTACCCAAGCCCGCAGGCATCCAACGATGCGTTCTTCGAGATCGGGCGGTTGATCGCCGGGC
CATGGCTGCAAATTGTCATTGCGCTCACGGTGGCGATCAGCGCGGCAATCGCCAATTCATTGGTTGCACAGGCGGCCACG
TCGCGACTGTTGTTCGCCATGGCGCGCGACCGGCAATTGCCGGGCTTTCTGCGCTACATCCACCCGCGCACCGGCGTACC
GCAGCGTGCGATCCTGCTGGTGGCGGGCCTGAGTCTGGTATTGGGCGAAGTCTTCGTCGGGCAGATCGCGCTGCTGTCGT
CGCTGTGCAACGTCGGCGCACTGACCGCCTTCGTGTTGCTGCATATCGCAGTGCTGTGGCACTTCCGCACCCACGGCCGG
CGTGTGCTGCATGGCATGGTGCCCCTGATCGGGATCGTCATCCTGGCCTACGTCCTGCTCAATGCCGACCTGCATGCACA
ACTGGGCGGCGCTGCGTGGATGGCGGTGGGGCTGACGGTACTGGCGTTTCTGAAACTCAGCGGACGCTCCACCGAATTGC
GCGCCAGCGACGCGCTGGAATAG

Protein sequence :
MTDTPRRDDAATLQRFGYAQELKRQLTLKDLLIYGLVCMVPTAPFSIFGGVFDISAGMVPLTYLVGFVAMLFTALSYQQM
SQAFPVAGSVYAYVGRGLSSGMGFLAGWAILLDYLLVPTLLYVVGANAMQTVLPAIPQPAWIGFFVVLNTVVNLRGIETT
ARANRFFLLAQLLVLAVFVVLATLAIQRGVNGAHWSWRPLYNPQAFSPQLIFSALSVAVVSFLGFDAISTMSEEARGGNR
VVGRATLLALLIVAGLFILQTWLAALLQPTLQCYPSPQASNDAFFEIGRLIAGPWLQIVIALTVAISAAIANSLVAQAAT
SRLLFAMARDRQLPGFLRYIHPRTGVPQRAILLVAGLSLVLGEVFVGQIALLSSLCNVGALTAFVLLHIAVLWHFRTHGR
RVLHGMVPLIGIVILAYVLLNADLHAQLGGAAWMAVGLTVLAFLKLSGRSTELRASDALE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ycjj YP_216387.1 amino acid permease Not tested SPI-2 Protein 5e-63 42
orf48 NP_460344.1 amino acid permease Not tested SPI-2 Protein 5e-63 42
STY1743 NP_456146.1 putative amino acid permease Not tested SPI-2 Protein 1e-63 42
t1247 NP_805052.1 amino acid permease Not tested SPI-2 Protein 1e-63 42
ORF48 CAA68204.1 amino acid permease YeeF like protein Not tested SPI-2 Protein 4e-60 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
XACM_2923 YP_004852474.1 amino acid transporter VFG0480 Protein 2e-63 42