Gene Information

Name : pip (XACM_2921)
Accession : YP_004852472.1
Strain : Xanthomonas axonopodis F1
Genome accession: NC_016010
Putative virulence/resistance : Virulence
Product : proline imino-peptidase
Function : -
COG functional category : R : General function prediction only
COG ID : COG0596
EC number : -
Position : 3347559 - 3348500 bp
Length : 942 bp
Strand : -
Note : COG0596; R General function prediction only

DNA sequence :
ATGCAGTGCACCGAGGGTTACGTCGAATTCCGCGGCTACCGTACCTGGTACCGCATTACCGGCGACCTGTGCGCAGATGC
CTGCCCGCTGTTGGTGCTGCACGGCGGCCCCGGATGCACGCACGACTACGTGGACAGCTTCAAGGACCTGGCGGCCAACG
GCCGCGCGGTGATCCACTACGACCAGCTGGGCAACGGAAACTCCACCCATCTGCGCAATGCCGAGCCAGGCTTCTGGACA
GTGGGGCTGTTTCTGGACGAGCTGCAGACGCTGATCGCGCATCTGGGGCTGTCGCAGTACGCATTGCTGGGCCAGTCCTG
GGGCGGAATGCTGGCCGCCGAGCACGCCGTGCGCCGGCCGGCCGGCCTGCGAGCGCTGGTCATCGCCAATTCGCCCGCCT
CGATGGGGTTGTGGCGCGCGGCTGCGCTGCGTCTGCGCGCGCGCCTGCCTGACGATATCCAGGCCGCATTGGACGAGCAC
GAAGCCGCCGGTACGCTGGACCATCCGGCCTACCGCGCAGCCAGTCAGGTGTTCTATGCGCAGCACGTATGTCGCGTGCT
GCCGTGGCCTGCCGAGGTCGCGCGGACGTTTGCCGCCATCGACGCCGACCCCACCGTGTATCACGCCATGAACGGCCCGA
CCGAATTCCACGTGGTGGGCAGCTTGCGCAACTGGAGCATCATCGAGCGCCTGCACCGCATCACCGCACCCACGCTGGTG
CTCTCTGGCAAGTACGACGAAGCCACGCCGGAAACCGTCGAGCCCTATGCGCGGTTGATCCCGGATGCGCGCTGGCACGT
GTTCGCCAACTCCAGCCACATGCCGCACGTGGAAGAACGCGCGGCGTGCATGCGCCTGGTCGGCAATTTCCTGGACGATC
AGACACCGTGGCCCGGTGGACAAATGCTGCGCTCCTCAGCACTGGCCAATCGCGCTGTCTGA

Protein sequence :
MQCTEGYVEFRGYRTWYRITGDLCADACPLLVLHGGPGCTHDYVDSFKDLAANGRAVIHYDQLGNGNSTHLRNAEPGFWT
VGLFLDELQTLIAHLGLSQYALLGQSWGGMLAAEHAVRRPAGLRALVIANSPASMGLWRAAALRLRARLPDDIQAALDEH
EAAGTLDHPAYRAASQVFYAQHVCRVLPWPAEVARTFAAIDADPTVYHAMNGPTEFHVVGSLRNWSIIERLHRITAPTLV
LSGKYDEATPETVEPYARLIPDARWHVFANSSHMPHVEERAACMRLVGNFLDDQTPWPGGQMLRSSALANRAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pip YP_216388.1 hydrolase or acyltransferase Not tested SPI-2 Protein 4e-39 42
orf32 NP_460345.1 proline iminopeptidase Not tested SPI-2 Protein 9e-40 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pip YP_004852472.1 proline imino-peptidase VFG0481 Protein 4e-40 42