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Name : XACM_2301 (XACM_2301) Accession : YP_004851862.1 Strain : Xanthomonas axonopodis F1 Genome accession: NC_016010 Putative virulence/resistance : Virulence Product : nucleoside-diphosphate sugar epimerase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : - Position : 2621877 - 2623784 bp Length : 1908 bp Strand : - Note : COG1086; M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism DNA sequence : ATGATTTCCTGGCGTGACCGTTTGACCAAGGCCCTGCCGCAGATAGCGGTCGTGGTACATGATCTGCTGATGGTGTGGGT ATGCTGGCAGCTCCTGCATGCCGGCCGCTACTCGATGCTACGCGACGCGCCGGATCTGCCGCTGTGGGACTGGCGCACCG CGGTGGTGCTGGTGGCGCAGGGCCTGGTGTTCTGGAAGATGGGGTTGTATCGCGGGTTGTGGCGCTTCGCCTCGGTGCCG GACCTGTGGAACATCTTCAAGTCGAGTTTTCTCGGATTGGTCGCAATCGTGCTGGCGTTGGCGTACGACCGTCTGGATGG CGTGCCGCTGTCGGTGCTGGTGGTCTATCCCTTTGCGTTGTCGGCCATGCTGGGTACGCCGCGTCTGCTGTATCGCGCTT GGAAGGACTACCAGATCGCGCATTCCGGTGATGCGGGGCAGCGCGTGCTGATCCTCGGCGCCGGGCGCGCCGCCGAAGGG TTGGTGCGCGATCTTCGCCGTACCGGCGCGTTTGTGCCGATTGGCTATCTGGACGATGCCAGCAACCTGCATGGCGCCAA GATCCAGGGCCTCAATGTGCTGGGCAATCTGGACCAGGCCGCCGCGATTGCCAAAGAGACTGCTGCCAAATTACTGGTGA TCGCGATTCCATCGCTGGATGCCTCCGGCATGCAGCGCGTGGTGGCGATTTGCGAAAGCACCGGCTTGCCGTTCCGCATG GTGCCCAAGCTGATCAACGTGCTGGAAGGGCGCTCCTTGCCGGGCGAGTTGAAGGAGGTCGCGATCGAGGACCTGCTCAA CCGCAAGCCGGTCACGCCCGACTGGCGCCTGATCCGCGACTGGCTGACCAACAAGACCGTGATGGTGACCGGCGCCGGCG GTTCGATCGGTTCGGAAGTCTGCCGCCAGTGCGCACGCCATGGCGCGCGCCGGATCGTGCTGCTGGAAATCGACGAGCTG GCGCTACTGACCATCGACTCGGATCTGCGCCGGCTGTTTCCGGATATCGAAGTGGTGCGCGTGTTGGGCGATTGCGGCGA CCCGGCGGTCGTGGCGCATGCGTTGAACACTGCCACGCCTGACGCGGTCTTTCATGCGGCTGCGTACAAGCAGGTGCCGT TGCTGGAAGAGCAGTTGCGCGAGGCGGTGCGCAACAACGTGCTGGCGACCGAGAACGTGGCGCGCGCCTGCCAGCGGGCA CGTATCGAGACGTTCGTCTTCATTTCCACCGACAAGGCGGTCGAGCCGGTCAATGTGCTGGGCGCAAGCAAGCGCTATGC AGAAATGATCTGCCAGAGCCTTGACGCGCGCGATGCGCCGACGCGCTTCATCACCGTGCGCTTCGGCAACGTGCTGGATT CGGCCGGCAGCGTGGTGCCGTTGTTCCGCGAACAGATCCGCCAGGGCGGCCCGGTGACCGTGACGCATCCGGATGTCACG CGTTACTTCATGACCATCCCCGAAGCCTGCCAGTTGGTCATCCAGGCGGCTGCATCTGCATCGCATGGTGCGATCTATAC GCTGGACATGGGCGAGCCGGTGCCGATTCGCTTGCTTGCCGAGCAGATGATCCGACTGGCCGGCAAGCAGCCGGGCAAGG ACGTGGCGATTCTCTATACCGGCCTGCGGCCGGGCGAGAAGCTGCATGAGACGCTGTTCTATTCCGACGAAGACTATCGT CCCACCGCGCACCCCAAGATTCTGGAAGCCGGTGTGCGCGAGTTCTCGCATGAGCAGGTGCTGCAGCTGGTGACGCGCTT GCGCGAGGCCGTTAACCGCTATGACATCAACGCGATGGAGACTGTATTGGGCAGCCTGATGCCGGATTTCGCGGCTGCTC GACGGAAAGTCGACGCGCGATCTGATACGGTCGTTCCATTCCCCGCACGTGAGGTCAGAAGACTGTAA Protein sequence : MISWRDRLTKALPQIAVVVHDLLMVWVCWQLLHAGRYSMLRDAPDLPLWDWRTAVVLVAQGLVFWKMGLYRGLWRFASVP DLWNIFKSSFLGLVAIVLALAYDRLDGVPLSVLVVYPFALSAMLGTPRLLYRAWKDYQIAHSGDAGQRVLILGAGRAAEG LVRDLRRTGAFVPIGYLDDASNLHGAKIQGLNVLGNLDQAAAIAKETAAKLLVIAIPSLDASGMQRVVAICESTGLPFRM VPKLINVLEGRSLPGELKEVAIEDLLNRKPVTPDWRLIRDWLTNKTVMVTGAGGSIGSEVCRQCARHGARRIVLLEIDEL ALLTIDSDLRRLFPDIEVVRVLGDCGDPAVVAHALNTATPDAVFHAAAYKQVPLLEEQLREAVRNNVLATENVARACQRA RIETFVFISTDKAVEPVNVLGASKRYAEMICQSLDARDAPTRFITVRFGNVLDSAGSVVPLFREQIRQGGPVTVTHPDVT RYFMTIPEACQLVIQAAASASHGAIYTLDMGEPVPIRLLAEQMIRLAGKQPGKDVAILYTGLRPGEKLHETLFYSDEDYR PTAHPKILEAGVREFSHEQVLQLVTRLREAVNRYDINAMETVLGSLMPDFAAARRKVDARSDTVVPFPAREVRRL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 3e-79 | 42 |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 3e-73 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| XACM_2301 | YP_004851862.1 | nucleoside-diphosphate sugar epimerase | VFG1300 | Protein | 7e-76 | 43 |
