Gene Information

Name : gacA (XACM_2211)
Accession : YP_004851772.1
Strain : Xanthomonas axonopodis F1
Genome accession: NC_016010
Putative virulence/resistance : Virulence
Product : LuxR/UhpA family transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2197
EC number : -
Position : 2521545 - 2522192 bp
Length : 648 bp
Strand : +
Note : COG2197; T Signal transduction mechanisms; K Transcription

DNA sequence :
ATGACCATCAGAGTTTTTCTGATCGACGATCATGCACTCGTGCGTACAGGCATGAAGATGATTCTGTCCAAGGAAGTGGA
CGTCGATGTGGTGGGTGAAGCAGAGAGCGGCGAAGCCGCATTGCCGCAGATTCGTCAACTCAAACCGGACATCGTGCTGT
GCGATCTGCATTTGCCCGGCGTCAGCGGCCTGGAAATTACCGAGCGCATCGTCAAGGGCGACTACGGTACGCGGGTCATC
ATCGTCTCCGTGCTCGAAGACGGCCCATTGCCCAAGCGTTTGCTCGAGGCAGGCGCCTCCGGCTATGTGGGCAAGGGTGG
TGACGCGCACGAGTTGCTGCGCGCGGTGCGTGAAGTCGCATTGGGACGGCGTTATCTCGGCAATACGATCGCGCAGAACC
TGGCTCTGTCTAATCTGGAAGGTGGCGGTTCACCGTTTGATGCATTGTCGCCCCGTGAGCTGGAAGTGGCCTTGCTGCTG
ACCCAGGGCCTGCGCCAGGAAGACATCGCCAAGCGCCTGAACCTCAGCGCCAAGACCATCAACACGCACAAGGCACGCCT
GTTCGAGAAGGTCGGCATCCAGGACAACATTGCGCTGGCGCGGCTAGCCAATCAATACGGTCTGACCGATCCCTCCAGGG
TGCTGTGA

Protein sequence :
MTIRVFLIDDHALVRTGMKMILSKEVDVDVVGEAESGEAALPQIRQLKPDIVLCDLHLPGVSGLEITERIVKGDYGTRVI
IVSVLEDGPLPKRLLEAGASGYVGKGGDAHELLRAVREVALGRRYLGNTIAQNLALSNLEGGGSPFDALSPRELEVALLL
TQGLRQEDIAKRLNLSAKTINTHKARLFEKVGIQDNIALARLANQYGLTDPSRVL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00302 YP_008207767.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR25 Protein 2e-41 45
BJAB0868_00306 YP_008211632.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR26 Protein 2e-41 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
gacA YP_004851772.1 LuxR/UhpA family transcriptional regulator VFG1889 Protein 2e-41 47