Gene Information

Name : lolD (XACM_2190)
Accession : YP_004851755.1
Strain : Xanthomonas axonopodis F1
Genome accession: NC_016010
Putative virulence/resistance : Resistance
Product : ABC transporter-type lipoprotein-releasing protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2501918 - 2502652 bp
Length : 735 bp
Strand : +
Note : COG1136; V Defense mechanisms

DNA sequence : 
ATGAATGAGATCCGGGAAGCGGCCGTGCAAACACCAGAACAGGCAACTGCGGTGATCCGCGCCGAAGCGCTGGCCAAGAC
CTACGACGAAGGCAAGATGCGCACGCCGGTATTCGATGGCCTGGATCTCTCGGTGGCCACCGGCGAAACCGTAGCGATCG
TCGGTGCCTCCGGCGCCGGCAAGAGCACCTTGCTGCATCTGCTCGGCGGGCTGGATATTCCGACCTCCGGCGAGGTGTAT
GTGGCCGGCGAGCGCATGTCGGCGCTGTCCGACGCGCAGCGCGGCAAGCTGCGTAACCAGGCGCTTGGCTTCGTCTACCA
GTTCCATCACTTGTTGCCCGAATTCACCGCGTTGGAGAACGTGATGATGCCGGTGCTGTTGTCCGGCAAGGATGTGGCCG
TCGCCAAGGGTCAGGCACTGCAACTGCTGGAATCGGTTGGGCTTGGGCATCGCGTCGAACACAAGCCCAGCGAACTCTCC
GGGGGCGAACGTCAGCGCTGTGCGGTGGCGCGTGCATTGGTCAACAAGCCGGGCTGCGTATTGGGCGACGAGCCCACCGG
CAATCTGGACGACAAGACCGCGGGCACCGTGTTCGAGCTGATGCTGGAGCTCAACCGCGCCCAGCGCACCAGCCTGGTAT
TGGTGACGCACGACCGCGGCTTGGCACGGCGTCTGGACCGCGTGCTGGAGCTAAACCAGGGCAAGCTGCGCGAATTGGCG
CCGTCTGCGGTGTAA

Protein sequence : 
MNEIREAAVQTPEQATAVIRAEALAKTYDEGKMRTPVFDGLDLSVATGETVAIVGASGAGKSTLLHLLGGLDIPTSGEVY
VAGERMSALSDAQRGKLRNQALGFVYQFHHLLPEFTALENVMMPVLLSGKDVAVAKGQALQLLESVGLGHRVEHKPSELS
GGERQRCAVARALVNKPGCVLGDEPTGNLDDKTAGTVFELMLELNRAQRTSLVLVTHDRGLARRLDRVLELNQGKLRELA
PSAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-27 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-28 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-28 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-28 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lolD YP_004851755.1 ABC transporter-type lipoprotein-releasing protein NC_012469.1.7686878. Protein 4e-38 45
lolD YP_004851755.1 ABC transporter-type lipoprotein-releasing protein NC_008702.1.4606598. Protein 4e-30 41