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Name : clpB1 (XACM_2105) Accession : YP_004851675.1 Strain : Xanthomonas axonopodis F1 Genome accession: NC_016010 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease subunit Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 2409426 - 2412164 bp Length : 2739 bp Strand : + Note : COG0542; O Posttranslational modification, protein turnover, chaperones DNA sequence : ATGGCAGACATCAGTCGCGCCGCCTTGTTCGGCAAGCTCAACAAGACCACGTATCGCGGCATCGAATCGGCCACCGCCTT CTGCAGGCTGCGTGGCGACCGCGAGGTGGATCTGCTGCATTGGCTGCATCAGTTGCTGCAGGCGCAAGACGGCGACCTGC ATCGCATCGTGCGTCATTTTTCGCTCGATGCGGCGCGACTTGCGCAGGACCTGACCGCAGCGCTCGATCGGCTGCCGCGC GGCGGTGGCGGGCACTTCGATCTGTCGGCCAGCGTGGAAGAAGCAGTGGAACGCGCCTGGGTGCACTGCACGTTGCGCTA CGGCCGGCAACGCATCCGTGGCGGCGACCTGCTGGTGGCGATCCTGCATACGCGCAGCCTGCGCAACGGCTTGCTGGCCA TGTCCAGCGAGTTCGGCAAGCTGCGCGCGGAAGCACTAGCGGACGATCTGGACGCCATCGTCGCCGGCTCGCCGGAGGAC GATGCCACCGATATTGCGGCGGCCAGCGCTCCCGCCGGACCAACCGCCGCTGGTGGGACTGCTGCGCTCGCGCTGTATAC GGTCGATCTCACCGCACAGGCACGCGAGGGCAAGCTGGACCCGATCATCGGCCGCGACGACGAGATCCGCCAGGTCGTCG ATATCCTGATGCGCCGCCGCCAGAACAACCCGATCCTGGTTGGCGAGGCCGGTGTCGGTAAGACCGCGGTGGTGGAAGGC TTCGCACAACGCATCGCGCGCGGCGATGTGCCGCCCGCGTTGAAGGACGTGCAGCTGCGCACGCTGGATGTGGGCCTGCT GCAGGCCGGCGCCAGCATGAAGGGCGAATTCGAGCAACGCCTGCGCGCAGTCATCGACGAAGTGCAGGCCAGCCCCAAGC CGATCATTCTGTTTGTGGATGAAACCCACACCCTGGTCGGCGCCGGTGGCGCGGCCGGTACCGGCGATGCGGCCAACCTG CTCAAGCCCGCACTGGCGCGTGGCACCTTGCGCACCGTGGGGGCGACCACGTTTGCCGAGTACAAGAAGTACATCGAAAA GGATCCGGCATTGACGCGGCGCTTCCAGGCCGTGCAGGTGGACGAGCCGGACGAGGCCAAGGCGGTGCGCATGATGCGCG GCGTCGCTTCGATGATGGAACAGCACCACCGTGTGCAGATCCTGGACGAAGCGCTGGAAGCGGCGGTCAAGCTCAGTCAC CGCTACATCCCGGCGCGGCAGCTGCCGGACAAATCGGTGAGCCTGCTCGACACCGCCTGCGCGCGCGTGGCGGTGAGCCT GCACGCTACGCCTGCGGAAGTGGACGACAGTCGCCGCCGCATCGAATCGCTGGAGACCGAGCACGCCATCATCGAACGCG AGCGTGCGATTGGCATCGTGGTGGATGAGCGTGCTGCAGCTTGCGCCAGCCTGCTGCAAAGCGAGCACGGCCGCCTGCAC GAGCTGGAACAGCGCTGGGTTGGCGAGAAGGCATTGGTGGACGAGCTGTTGTCGTTGCGCGCACAACTGCGTAGCGGTAA TTCATCGGTGGAAGGCACCGGCAGTGCGTTGGAAGCAGAGGCCGACACCGACGCAGATGCCGCCGCAGATGCCGCTGTCG CGCAGTCGGCGTCTGGCGACACTGCCGTGCTCGACGCACCGGTACAAGTTGATCGCGACACCTTACTGGCACGTCTGCAG CTGGTGCAGGCTGAACTGGCAGCATTACAAGGCGAATCGCCGCTGATCCTACCCACGGTCGATTACCAGGCGGTCGCCGC CGTGGTCGCCGACTGGACCGGCATCCCGGTCGGGCGCATGGCGCGCAACGAGATCGACACCGTGCTGCGCCTGCCCGAGC TGCTGGCCAAGCGCGTGATCGGCCAGGACCACGCCATGGAAATGATCGCCAAGCGCATCCAGACCAGCCGCGCCGGTCTG GACAACCCGGACAAACCGATCGGCGTGTTCCTGCTGGCCGGCACCTCCGGCGTGGGCAAGACCGAAACCGCACTCGCGCT GGCCGAAACCTTGTACGGCGGCGAACAAAATCTGATCACCATCAACATGAGCGAGTACCAGGAAGCGCATACCGTCTCCT CGCTCAAGGGTGCACCGCCGGGCTATGTGGGCTACGGCGAAGGCGGCGTGCTCACCGAAGCGGTGCGCCGCAAGCCGTAC TCGGTCGTGTTGCTGGACGAAGTGGAAAAAGCCCACCCGGACGTGCACGAACTGTTCTTCCAGGTCTTCGACAAGGGCTG GATGGAAGACGGCGAAGGCCGCCGCATCGACTTCCGCAACACCTTGATCATCCTGACCAGCAACGCCGGCACCGACCTGA TCGCCAGCCTGTGCAAGGACCCGGAACTGATACCCGACCCGGAAGCCATGGCCAAGGCCATCCGCGAGCCGTTGTTGAAG GTGTTTCCGCCGGCATTGCTCGGGCGGCTGGTGGCGATTGCGTATTACCCGCTGAGCAACGACATGCTCGGCCAGATCGT GCGGTTGCAGTTGAATCGCATCAAGAAGCGCATCGAGGAGCGCTACAAGATTCCGTTCGAGTACGACCACTCGGTGGTGG AGCTGGTGGTATCGCGGTGCACTGAAAGCGAGTCGGGCGGACGAATGATTGATGCGATTTTGACTAACTCGATGTTGCCG GAGATCAGTCGGCAGTTTCTCACTCGGGTGATTGAGGGCAAGAAAATCAATCATTCGCGCGCATCGGCCGTGGCGGATGA CTTTTTCTACGAATTCTGA Protein sequence : MADISRAALFGKLNKTTYRGIESATAFCRLRGDREVDLLHWLHQLLQAQDGDLHRIVRHFSLDAARLAQDLTAALDRLPR GGGGHFDLSASVEEAVERAWVHCTLRYGRQRIRGGDLLVAILHTRSLRNGLLAMSSEFGKLRAEALADDLDAIVAGSPED DATDIAAASAPAGPTAAGGTAALALYTVDLTAQAREGKLDPIIGRDDEIRQVVDILMRRRQNNPILVGEAGVGKTAVVEG FAQRIARGDVPPALKDVQLRTLDVGLLQAGASMKGEFEQRLRAVIDEVQASPKPIILFVDETHTLVGAGGAAGTGDAANL LKPALARGTLRTVGATTFAEYKKYIEKDPALTRRFQAVQVDEPDEAKAVRMMRGVASMMEQHHRVQILDEALEAAVKLSH RYIPARQLPDKSVSLLDTACARVAVSLHATPAEVDDSRRRIESLETEHAIIERERAIGIVVDERAAACASLLQSEHGRLH ELEQRWVGEKALVDELLSLRAQLRSGNSSVEGTGSALEAEADTDADAAADAAVAQSASGDTAVLDAPVQVDRDTLLARLQ LVQAELAALQGESPLILPTVDYQAVAAVVADWTGIPVGRMARNEIDTVLRLPELLAKRVIGQDHAMEMIAKRIQTSRAGL DNPDKPIGVFLLAGTSGVGKTETALALAETLYGGEQNLITINMSEYQEAHTVSSLKGAPPGYVGYGEGGVLTEAVRRKPY SVVLLDEVEKAHPDVHELFFQVFDKGWMEDGEGRRIDFRNTLIILTSNAGTDLIASLCKDPELIPDPEAMAKAIREPLLK VFPPALLGRLVAIAYYPLSNDMLGQIVRLQLNRIKKRIEERYKIPFEYDHSVVELVVSRCTESESGGRMIDAILTNSMLP EISRQFLTRVIEGKKINHSRASAVADDFFYEF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 1e-124 | 47 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 1e-124 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB1 | YP_004851675.1 | ATP-dependent Clp protease subunit | VFG2076 | Protein | 0.0 | 70 |
