Gene Information

Name : XACM_1986 (XACM_1986)
Accession : YP_004851556.1
Strain : Xanthomonas axonopodis F1
Genome accession: NC_016010
Putative virulence/resistance : Unknown
Product : short chain dehydrogenase
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 2262190 - 2262969 bp
Length : 780 bp
Strand : -
Note : overlaps CDS with the same product name; COG1028; I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only

DNA sequence :
ATGAGCATTGACACTACCATGGCAGCAGTAGATCCTGTTTCCGCGCTGCTGCGCGACCTATATGGCCTGCACGGCAAGAC
CGTATTGGTGACCGGCGCATCCAAAGGCATCGGTGAAGCGGTCGCACGTGCATGCGCCGCCGCAGGGGCACGCCTGATCG
TCACCGGGCGCGATGCGGAACGTCTGCAAACCACGCTGGCATCGCTGCACGGCGATGGCCATCGCCTGTTTGCTGGCGAC
CTGAGCGATGCGGCTGTCGTGCAACAACTCGCTGCCGATTGCGGGCCCGTCGACGGTGTGGTGCACAGCGCCGGCATTCG
CGGGCTGTCGCCGATGAAGCTGGTAAGCGAAAAATTCCTGCGCGAGGTCATGGACATCAACTATCTGGCGCCGGTGATGC
TGACCCGCCACCTGTTGGCGCGGCAATCACTGCGCTCCGGTGGCTCGGTGATTTTCCTGTCGTCCATCGCCGCGTTGACC
GGTACTGTCGGCGTTGGTCCGTATGCAGGCTCGAAGGCCGCATTGCTCGGTACTTTGCGACCGTTGGCGCTGGAGCTAGC
ACGTCGGAAAATCCGCGCCAACGCGTTGTGCCCCGGCCTGGTCGAGACCTCATTGATCAACGAGGACAAGGCCTGGTTCG
AGGAAAGTCGCAAGCGCTATCCGCTGGGCATCGGGCAGCCGGAAGACGTTGCATTGGCATGCCTGTACTTCCTCTCCGAT
GCCAGCAGCAAGGTCACCGGACAAGCCTTCAGCATGGACGGAGGCGTGGAATTCGCATGA

Protein sequence :
MSIDTTMAAVDPVSALLRDLYGLHGKTVLVTGASKGIGEAVARACAAAGARLIVTGRDAERLQTTLASLHGDGHRLFAGD
LSDAAVVQQLAADCGPVDGVVHSAGIRGLSPMKLVSEKFLREVMDINYLAPVMLTRHLLARQSLRSGGSVIFLSSIAALT
GTVGVGPYAGSKAALLGTLRPLALELARRKIRANALCPGLVETSLINEDKAWFEESRKRYPLGIGQPEDVALACLYFLSD
ASSKVTGQAFSMDGGVEFA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK15329.1 unknown Not tested Not named Protein 2e-36 45