Gene Information

Name : XACM_1799 (XACM_1799)
Accession : YP_004851374.1
Strain : Xanthomonas axonopodis F1
Genome accession: NC_016010
Putative virulence/resistance : Unknown
Product : xylose isomerase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG2115
EC number : -
Position : 2015695 - 2017032 bp
Length : 1338 bp
Strand : +
Note : COG2115; G Carbohydrate transport and metabolism

DNA sequence :
ATGAGCAACACCGTGTACATCGGCGCGAAAGAATATTTCCCCGGCATCGGCAAGATCGGCTTCGAAGGCCGCGATTCGGA
CAACCCGCTCGCGTTCAAGGTCTACGACGCCAACAAAACCATCGGCGACAAGACCATGGCCGAGCATCTGCGCTTTGCCG
TGGCCTACTGGCACAGCTTCTGCGGCAATGGCGCCGACCCGTTCGGCCCGGGCACGCGGGCGTATCCGTGGGATGCGGGC
ACTACCGCGTTGAACCGTGCCGAAGCCAAGGCCGATGCGGCGTTCGAGTTCTTCACCAAGCTCGGCGTGCCCTACTACTG
CTTCCACGACATCGACCTGGCACCGGATGCCGACGACATCGGCGAGTACGAAAAGAATCTCAAACACATGGTGGGCATCG
CCAAGCAGCGTCAGGCCGACACCGGCATCAAGCTGTTGTGGGGCACGGCCAACCTGTTCTCGCATCCGCGCTACATGAAT
GGTGCATCGACCAACCCGGACTTCAATGTCGTGGCGCGTGCGGCGGTGCAGGTCAAGGCCGCGATCGATGCGACCGTTGA
ACTCGGTGGCGAGAACTACGTGTTCTGGGGCGGCCGCGAAGGCTATGCCTGCCTGCACAACACGCAGATGAAGCGCGAGC
AGGACAACATGGCGCGCTTCCTCACCCTGGCACGTGATTACGGCCGTGCGATTGGCTTCAAGGGCAATTTCCTGATCGAG
CCCAAGCCCATGGAGCCGATGAAGCACCAGTACGATTTCGATAGCGCCACGGTGATCGGCTTCCTGCGCCAGCATGGCCT
GGATCAGGACTTCAAGCTCAACATCGAGGCCAATCACGCCACCTTGTCCGGCCATAGCTTCGAGCATGACCTGCAGGTGG
CATCCGATGCCGGCCTGCTCGGCAGCATCGATGCCAACCGCGGCAACCCGCAGAACGGCTGGGACACCGACCAGTTCCCG
ACCGACCTGTACGACACCGTCGGCGCCATGCTGGTGGTGCTGCGGCAGGGTGGTCTGGCACCGGGCGGCCTGAACTTCGA
TGCCAAGGTGCGTCGCGAATCGTCCGACCCGCAGGACCTGTTCCTGGCCCACATCGGCGGCATGGACGCGTTCGCACGCG
GGCTGGAAGTGGCCAACGCGCTGCTGACCGCCTCGCCGCTGGAACAGTGGCGCGCCGAGCGTTACGCCAGCTTCGACAGC
GGCGCCGGCGCGGACTTTGCCGCAGGCAAGACCACGCTGGCCGATCTGGCCAAGCATGCGGCCGGCAATGCGCCACAGCA
GCTCAGCGGCCGCCAGGAAGCGTATGAAAACCTGATCAATCAGTATCTGACGCGTTGA

Protein sequence :
MSNTVYIGAKEYFPGIGKIGFEGRDSDNPLAFKVYDANKTIGDKTMAEHLRFAVAYWHSFCGNGADPFGPGTRAYPWDAG
TTALNRAEAKADAAFEFFTKLGVPYYCFHDIDLAPDADDIGEYEKNLKHMVGIAKQRQADTGIKLLWGTANLFSHPRYMN
GASTNPDFNVVARAAVQVKAAIDATVELGGENYVFWGGREGYACLHNTQMKREQDNMARFLTLARDYGRAIGFKGNFLIE
PKPMEPMKHQYDFDSATVIGFLRQHGLDQDFKLNIEANHATLSGHSFEHDLQVASDAGLLGSIDANRGNPQNGWDTDQFP
TDLYDTVGAMLVVLRQGGLAPGGLNFDAKVRRESSDPQDLFLAHIGGMDAFARGLEVANALLTASPLEQWRAERYASFDS
GAGADFAAGKTTLADLAKHAAGNAPQQLSGRQEAYENLINQYLTR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
xylA NP_814326.1 xylose isomerase Not tested Not named Protein 9e-96 52
ef0082 AAM75286.1 EF0082 Not tested Not named Protein 7e-96 52