Gene Information

Name : smpB (XACM_1483)
Accession : YP_004851063.1
Strain : Xanthomonas axonopodis F1
Genome accession: NC_016010
Putative virulence/resistance : Unknown
Product : SsrA-binding protein
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0691
EC number : -
Position : 1670377 - 1670880 bp
Length : 504 bp
Strand : -
Note : COG0691; O Posttranslational modification, protein turnover, chaperones

DNA sequence :
ATGAGCAAGAAACAGACCAAGGATAAAGCAAACGGCGCGAAGGCCACGAAAACCATCGCGTTGAACAAGCGTGCGCGCCA
CGAATACCACCTGGAAGAACGCTACGAAGCCGGCCTGGCACTGCAGGGCTGGGAGGTCAAGGCGATCCGCGCCGGCCGCG
CCAACATCGTCGACGGCTATGCCTATGTGCGCTCCGGCGAGATCTACCTGATCGGCGCACAGATCACGCCGCTGATCCAG
GCCTCCACCCACACGGTGCCAGTGGAACGGCGCGACCGTAAACTGCTGCTGCACCGGGCCGAGATCGACAAGGTGCTCAC
CCGCGTGGAGCGCGAAGGCTACACCCTGGTGCCTACCGCGCTGTACTGGAGCAGCAACAAGGTCAAGCTGGAAATCGCCC
TGGCCAAGGGCAAGCAGAATCACGACAAGCGCGACGCCGCCAAGGACCGCGACTGGCAGCGCGACAAGCAGCGCGTGATG
CGGCGGCATAACCGCGATGCGTGA

Protein sequence :
MSKKQTKDKANGAKATKTIALNKRARHEYHLEERYEAGLALQGWEVKAIRAGRANIVDGYAYVRSGEIYLIGAQITPLIQ
ASTHTVPVERRDRKLLLHRAEIDKVLTRVEREGYTLVPTALYWSSNKVKLEIALAKGKQNHDKRDAAKDRDWQRDKQRVM
RRHNRDA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
smpB NP_230495.1 SsrA-binding protein Not tested VPI-1 Protein 3e-41 54
smpB YP_001800894.1 SsrA-binding protein Not tested Not named Protein 3e-22 43
unnamed AET14351.1 SsrA-binding protein Not tested SaPI68111 Protein 7e-21 42