Gene Information

Name : rplS (XACM_1272)
Accession : YP_004850854.1
Strain : Xanthomonas axonopodis F1
Genome accession: NC_016010
Putative virulence/resistance : Unknown
Product : 50S ribosomal protein L19
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0335
EC number : -
Position : 1424814 - 1425221 bp
Length : 408 bp
Strand : +
Note : COG0335; J Translation, ribosomal structure and biogenesis

DNA sequence :
ATGAGCAAACTCAACAAGACCATCCTGGCTGACTTCGAAGCCGCCCAGATCCAGCGCAAGCTGCCGGAATTCAACCAGGG
CGACACCGTTGTGGTGAACGTCAAGGTGAAGGAAGGCAACCGCGAGCGCGTGCAGGCCTATGAGGGCGTGGTGATCGGGA
CCAAGAATGCCGGCCTGAACTCCTCCTTCACCGTGCGCAAGATCTCGCACGGCTTCGGCGTCGAGCGCGTGTTCCAGACC
CACAGCGCCATCATCGACTCGGTCGAAGTGAAGCGTCGCGGTAAGGTGCGCGCCGGTAAGCTGTACTACCTGCGTGGTCT
GGAAGGCAAGGCTGCCCGCATCAAGGAAGATCTGGCCGCCGCTGCGCAGGCCAAGGCCGCTCGCCAGGCTGCTGCCAAGG
CCGAGTGA

Protein sequence :
MSKLNKTILADFEAAQIQRKLPEFNQGDTVVVNVKVKEGNRERVQAYEGVVIGTKNAGLNSSFTVRKISHGFGVERVFQT
HSAIIDSVEVKRRGKVRAGKLYYLRGLEGKAARIKEDLAAAAQAKAARQAAAKAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rplS AAS66827.1 50S ribosomal subunit protein Not tested SSR-1 Protein 5e-29 61
rplS CAA68924.1 ribosomal protein L19 Not tested Internalin Protein 3e-26 55