Gene Information

Name : XACM_0104 (XACM_0104)
Accession : YP_004849713.1
Strain : Xanthomonas axonopodis F1
Genome accession: NC_016010
Putative virulence/resistance : Virulence
Product : NAD-dependent aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 120872 - 122401 bp
Length : 1530 bp
Strand : +
Note : COG1012; C Energy production and conversion

DNA sequence :
ATGAACGCGCAACCTGCCACCAAGCCGCTCAACACCGATCCGCAGTCGATCTTCAAACCGCGCTACGACAACTTCATCGG
CGGCAAGTGGGTCGCGCCGAAGGGTGGTCAGTATTTCGACAACACCACGCCGATCAACGGCAAGGTCTTTACCTCGATCG
CGCGCTCCACCGCTCCGGATATCGAAGCGGCGCTGGATGCTGCGCACGCGGCCAAGGAGGCGTGGGGCAAGGCCTCCACC
ACCGAGCGCTCTAACGTATTGCTCAAAATCGCCGACCGCATCGAACAGAATCTCGAACTGCTCGCGTACGCCGAGACCTG
GGACAACGGCAAGCCGGTGCGCGAAACGCTCAACGCCGACGTGCCGTTGTGCGTGGATCACTTCCGCTATTTCGCCGGTG
CCATCCGCGCGCAGGAGGGCGGTATTTCCGAGATCGACAGCGACACCATCGCGTATCACTTCCACGAACCGTTGGGCGTG
GTGGGGCAGATCATCCCGTGGAATTTCCCGCTGCTGATGGCGTGCTGGAAACTGGCACCGGCGCTTGCCGCCGGCAACTG
CGTGGTGATGAAGCCGGCAGAGCAGACGCCTGCCTCAATTCTGGTGTTAATGGAACTCATCGGCGACCTGCTGCCGCCTG
GCGTGTTGAACGTGGTCAACGGCTTCGGCCTGGAGGCCGGCAAGCCGCTGGCCAGCAACCCGCGCATCGCCAAGATTGCG
TTCACCGGCGAAACCACCACCGGCCGGCTGATCATGCAGTACGCCAGCCAGAACCTGATTCCGGTGACGCTGGAGCTGGG
TGGCAAATCGCCCAACATCTTCTTCGCCGATGTGATGGCCGAAGACGACGATTTTCTCGACAAGGCGGTGGAAGGCTTCG
TGCTGTTCGCCTTCAATCAAGGCGAAGTGTGTACCTGCCCGTCGCGCGCGCTGATCCAGGAATCCATCTACGACAGGTTC
ATGGAAAAGGCGCTTGCGCGCGTGGCGGCGATCAAGCAGGGCAATCCGCTCGATCCCAACACCATGGTCGGTGCGCAGGC
GTCCAGTGAGCAGCTGGAAAAAATTCTCTCCTACATCGATATCGGCAAGCAGGAAGGTGCGCAAGTGCTGATCGGCGGCG
AGCGCAACACGCTCGAGGGCGACCTGGCCGGGGGCTTTTACGTCAAGCCCACGGTGTTCAAGGGGCACAACAAGATGCGC
GTGTTCCAGGAGGAGATCTTCGGCCCGGTGGTCTCGGTCACCACCTTCAAGGACGAAGCCGACGCGCTGGCGATCGCCAA
CGACACGCTATACGGCCTGGGTGCCGGCCTCTGGAGTCGCGACGCTTCGCGCCTGTATCGGATGGGCCGCGCGATCCAGG
CTGGCCGCGTGTGGACCAACTGCTATCACGCCTACCCGGCGCATGCTGCATTTGGCGGGTACAAGCAGTCGGGCATCGGC
CGCGAAAACCACAAGATGATGCTCGACCACTATCAACAGACCAAGAACCTGTTGGTGAGCTATTCGCCGAAGGCGCTGGG
GCTTTTCTAA

Protein sequence :
MNAQPATKPLNTDPQSIFKPRYDNFIGGKWVAPKGGQYFDNTTPINGKVFTSIARSTAPDIEAALDAAHAAKEAWGKAST
TERSNVLLKIADRIEQNLELLAYAETWDNGKPVRETLNADVPLCVDHFRYFAGAIRAQEGGISEIDSDTIAYHFHEPLGV
VGQIIPWNFPLLMACWKLAPALAAGNCVVMKPAEQTPASILVLMELIGDLLPPGVLNVVNGFGLEAGKPLASNPRIAKIA
FTGETTTGRLIMQYASQNLIPVTLELGGKSPNIFFADVMAEDDDFLDKAVEGFVLFAFNQGEVCTCPSRALIQESIYDRF
MEKALARVAAIKQGNPLDPNTMVGAQASSEQLEKILSYIDIGKQEGAQVLIGGERNTLEGDLAGGFYVKPTVFKGHNKMR
VFQEEIFGPVVSVTTFKDEADALAIANDTLYGLGAGLWSRDASRLYRMGRAIQAGRVWTNCYHAYPAHAAFGGYKQSGIG
RENHKMMLDHYQQTKNLLVSYSPKALGLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-151 65
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 2e-157 65
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 2e-157 65
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 2e-157 65
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-156 65
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 2e-66 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
XACM_0104 YP_004849713.1 NAD-dependent aldehyde dehydrogenase VFG0082 Protein 6e-152 65