Gene Information

Name : mutS (NH8B_0684)
Accession : YP_004845930.1
Strain : Pseudogulbenkiania sp. NH8B
Genome accession: NC_016002
Putative virulence/resistance : Virulence
Product : DNA mismatch repair protein MutS
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0249
EC number : -
Position : 689225 - 691771 bp
Length : 2547 bp
Strand : -
Note : -

DNA sequence :
ATGACCACACCCCAGCACACCCCGATGATGCAGCAGTACCTCGCCATCAAACGCGAGCACCAGGACAAACTGGTGTTCTA
CCGCATGGGCGACTTCTACGAACTGTTCTTCGAGGACGCCGAAAAGGCGGCGCGGCTGCTGGACATCACCCTGACCACGC
GCGGCGCCACGGCCGGTATCCCGATCAAGATGGCGGGCGTGCCCTACCATGCCGCCGAGGGCTACCTGGCGCGGCTGGTG
AAGCTCGGCGAATCGGTGGCCATCGCCGAGCAGATCGGCGACCCGGCGCTCGCCAAGGGCCCGGTGGAGCGCAAAGTGGT
GCGCATCGTCACTCCGGGCACGCTGACCGACTCGGCGCTGCTCGACGACAAGCGCGACAACCTGGTGCTCTCGCTCAACA
GCGTGCGCGGCAAGCTGGGCCTCGCCTGGCTGTCGCTGGCGAGCGGCGAATTCAAGGTGATGGAAACCAGCGTCGACGAG
CTGGCGAGCGAACTGGAGCGCCTCAAGCCGGCCGAGCTGCTGCTGCCGGACGAGAGCCAGGTCGGGCTGCTGGAGCAGCT
CTCGATCCCGAAGAAGAAGCTGCCGGCCTGGCAGTTCGATCAGCAGTCCGGGCAAGAGACGCTGATCCGACACTTCGGCA
CGCGTGACCTCGCCGGCTTCGGCGCCGAAGAGCTGACCGTGGCGATCGGCGCCGCTGGCGCCTTGCTGGGCTACGTCAAG
GCCACGCAGGGGGTGAACCCGGCGCACATCGCCAGCCTGGCGGTGGAAGACGAGAGCGACCTGATCCGCATGGACGCCGC
CACGCGGCGCAACCTGGAACTGACCGAAACCATCCGCGGCGAGCCCTCGCCCACCCTGGGCTCGCTGCTCGACTGCTGCG
CCACCAGCATGGGCAGCCGGCAGCTAGCGCACTGGCTGCACCACCCGCTGCGCCGCCACGGCAAGATCCGCGAGCGCCTC
GGCGCGGTGCGCGCGCTGCTGGCGCGCCACGGCGAGGTCGCCGAGCAACTCGCCGAGGTGGCCGACATCGAGCGCATCAC
CGCGCGCGTGGCGCTGCGCTCGGCGCGCCCGCGCGACCTGGCCGCGCTGCGCGACTCGCTCAAGGCGCTGACCGGGGTGA
AAGGGTTGGCCGAACAACTCGACAGCCCGCTGCTGCGCCAATTGGCCGTGCTGCTGCCGTCCGACAGCCCGGTGGCCACG
CTGCTGGCGAGCGCCATCCTGCCCGAACCCGCCACCTTCCTGCGTGATGGCGGCGTGATCAACCACGGCTTTTCGGCCAA
CCTGGACGAACTGCGGGCGATCCAGACCAACTGCGGCGAATTCCTGCTGCAACTGGAAGCCCGCGAGAAGGAGCGCACCG
GCATCCCCTCGCTCAAAGTTGAATTCAACCGCGTGCACGGCTTCTACATCGAGGTCAGCAAGGCGCAGGGCGACAAGGTG
CCGGACGACTACCGCCGACGCCAGACGCTGAAGAACGCCGAGCGCTACATCACGCCGGAACTGAAGGAATTCGAGGACAA
GGCGCTGTCGGCCAACGACCGCGCGCTGGCGCTGGAAAAACAGCTGTACGAGACGCTGCTCGACGAGTTGGCGCCGCATA
TCGCCGAGCTGCAGCTGATCGCCCAGGCGGTGGCCACGCTCGACGTGCTGGCCGCCTTCGCCCGCCATGCCGAAACGCGC
AACTACGTCGAACCGGAATTCGTCGACGAGGTGCGCCTCGAGATCATCGAGGGCCGCCACCCGGTGGTCGAGGCCGAGGT
CGAGCGCTTCATCGCCAACGACTCCTGCCTGTCCAACAGCCGCAAGCTGCTGCTGATCACCGGCCCCAACATGGGCGGTA
AATCGACCTACATGCGCCAGACCGCGCTGATCACGCTCTTGGCCCATGTCGGCTCGTTCGTGCCGGCCGACTCCGCCGTG
CTCGGTCCGATCGACCGCATCTTCACCCGCATCGGCGCCTCCGACGACCTCGCCGGTGGCCGCTCCACCTTCATGGTGGA
AATGACCGAAACCGCCAACATCCTCAACAACGCCAGCGACAAGTCGCTGGTGCTGATGGACGAAGTCGGCCGCGGCACCT
CCACCTTCGACGGCCTGGCGCTGGCTTGGGCCATCGCCAAGGCGCTGATCGAGAAGAACCGCGCCTACACCCTGTTCGCC
ACCCACTACTTCGAGCTGACGCGGCTCGCCAGCGACTACCCCGGCGTCGCCAACGTGCACCTCTCCGCCATCGAGCACAA
GGACAAGATCGTGTTTCTGCACCACGTCGAGGACGGCCCGGCAAGCCAGAGCTACGGCCTCGCCGTGGCGCAGCTGGCCG
GCGTGCCGGGCAAGGTGATCCGCGAGGCGCGCCGCCGTCTCGCCGAGCTGGAAAACCAGTCCGCCGCGACCCAGCAGCCG
GACCTGTTTGCGGCGCCGCTGCCCGCCGCTGCCGTCGAGCCGGAACCGCACCCGGCGCTGGAGCGGCTGGCCGAGCTGCA
ACCCGACGAACTGACCCCGCGCCAGGCGCTCGACCTGATCTACGCCTTGAAAACGATGCTGAATTAG

Protein sequence :
MTTPQHTPMMQQYLAIKREHQDKLVFYRMGDFYELFFEDAEKAARLLDITLTTRGATAGIPIKMAGVPYHAAEGYLARLV
KLGESVAIAEQIGDPALAKGPVERKVVRIVTPGTLTDSALLDDKRDNLVLSLNSVRGKLGLAWLSLASGEFKVMETSVDE
LASELERLKPAELLLPDESQVGLLEQLSIPKKKLPAWQFDQQSGQETLIRHFGTRDLAGFGAEELTVAIGAAGALLGYVK
ATQGVNPAHIASLAVEDESDLIRMDAATRRNLELTETIRGEPSPTLGSLLDCCATSMGSRQLAHWLHHPLRRHGKIRERL
GAVRALLARHGEVAEQLAEVADIERITARVALRSARPRDLAALRDSLKALTGVKGLAEQLDSPLLRQLAVLLPSDSPVAT
LLASAILPEPATFLRDGGVINHGFSANLDELRAIQTNCGEFLLQLEAREKERTGIPSLKVEFNRVHGFYIEVSKAQGDKV
PDDYRRRQTLKNAERYITPELKEFEDKALSANDRALALEKQLYETLLDELAPHIAELQLIAQAVATLDVLAAFARHAETR
NYVEPEFVDEVRLEIIEGRHPVVEAEVERFIANDSCLSNSRKLLLITGPNMGGKSTYMRQTALITLLAHVGSFVPADSAV
LGPIDRIFTRIGASDDLAGGRSTFMVEMTETANILNNASDKSLVLMDEVGRGTSTFDGLALAWAIAKALIEKNRAYTLFA
THYFELTRLASDYPGVANVHLSAIEHKDKIVFLHHVEDGPASQSYGLAVAQLAGVPGKVIREARRRLAELENQSAATQQP
DLFAAPLPAAAVEPEPHPALERLAELQPDELTPRQALDLIYALKTMLN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
mutS AAA80578.1 DNA mismatch repair protein Virulence SPI-1 Protein 0.0 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
mutS YP_004845930.1 DNA mismatch repair protein MutS VFG0562 Protein 0.0 55