Gene Information

Name : xerD (NH8B_0675)
Accession : YP_004845921.1
Strain : Pseudogulbenkiania sp. NH8B
Genome accession: NC_016002
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 677602 - 678492 bp
Length : 891 bp
Strand : +
Note : -

DNA sequence :
ATGAGCAGCAACGCTGAACAGATCGACCTGTTCCTCGACCAGCTGTGGCTGAGCGATGGCCTGTCGCGCAATACCCTGTC
AGCGTATCGGCGCGACCTGCTCAAGCTGGGGGCGCGTCTGGACGAAGAGGGTGGGGTGCGTTTGATCGAGGCGGGCGCGG
CGGATTTGCAGCGCGCCTTGTTGCAGGGGATCGAACAGGAGAAGGCCACCACCCGGGCGCGACTGGTGAGCGCCATGCGT
CGGTTCTACCAGTATCTGCACGCCAGCGGCCAACGCCCTGACGATCCATCCGCCGCGCTCGAGCGTCCCAAGCACGGGCA
GCCCTTACCCAAGAGTCTGTCGGAGAAGCACGTGGTCGCGCTGCTGGAGGCTCCTGATGTGGCTACGCCTCTGGGCTTGC
GCGACCGTGCCATGCTGGAGGTTTTGTACGCGACTGGCTTGCGGGTGTCGGAACTGGTTGGCTTGACGCTACAGCAGGTC
GATCTCACTAGCGGCGTTGTGATGACGCTGGGCAAGGGCGGCAAGGAGCGGCTGGTGCCGATGGGCGAGGTGGCGCAGGA
CTGGCTTGGGCGCTATCTGGCTACAGGGCGGCCGGCCTTGCTGACGGGGGTGCCTTGCGAGCAGGTGTTCGTCACTCGTC
TCAAGGCGGGTATGACGCGCCAGATGGCGTGGCACCTGATTTCAGGGTATGCACGCCGGCAGGGGCTGCCGCCGGTCAGT
CCGCACACGCTACGCCACGCGTTTGCCACGCATCTGGTCAACCATGGCGCCGACTTGCGCGTGGTGCAACTGCTGCTGGG
ACATTCTGATATTTCCACCACCCAGATCTACACCCATGTCGCCCGGGAGCGCTTGCGCCAGCTGCACGAGCAGCACCATC
CCCGCGGGTGA

Protein sequence :
MSSNAEQIDLFLDQLWLSDGLSRNTLSAYRRDLLKLGARLDEEGGVRLIEAGAADLQRALLQGIEQEKATTRARLVSAMR
RFYQYLHASGQRPDDPSAALERPKHGQPLPKSLSEKHVVALLEAPDVATPLGLRDRAMLEVLYATGLRVSELVGLTLQQV
DLTSGVVMTLGKGGKERLVPMGEVAQDWLGRYLATGRPALLTGVPCEQVFVTRLKAGMTRQMAWHLISGYARRQGLPPVS
PHTLRHAFATHLVNHGADLRVVQLLLGHSDISTTQIYTHVARERLRQLHEQHHPRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 3e-58 50
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 3e-58 50